Protein

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Genbank accession
BAW19123.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNVVEIDGILYIDGSPYNLQTLAPLGDNYKQGPARQLDALGTDWAFPPFMALQRATIWCPANGVVANMTSDCGANNSDYMNAGLTANGTAGYVPLQSGENFLVVAGGAGLGYTGGMFKRDRATMDALAAMPGVGSGSYANQSGWYMHMSMWLPNVSGSYLMWAQRADAYSNIVENIPADFTTAPSVYFGTSIGNDFKIRQCVGILGSYAVFFSSLANASPATAANTLHVVNRQTRVATAVSTAVTGAASQDRAGSVASEMTYTGASTGYFYAPESIAGGDNVAINVVSVDCTGTPTASNQVATIDWTNNGGVTAFTALSRNTSSARKIRASIIDRTATAGKRYLFVMVTEPTSSSFEAQAAMKGLLFEITTPTSLKFVQSISLADNARANGTLWTSDTHDRLIVKQVDRIAVYKFTDGTYFAKLAEYSGVWGGVGVDSTERIWMIDVTAGNLSAQGPSLYYVNPESIPNSLSVSFDSGTYQFAGTPVAANLNVDLRTAAGVRKAGNVTITITSGNAKFQDGTTQTTVTTLTTATLQVPVNIIGIGDVVIEATT
Physico‐chemical
properties
protein length:553 AA
molecular weight: 58167,49900 Da
isoelectric point:5,01817
aromaticity:0,09222
hydropathy:0,03942

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAW19123.1
1 553
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0099
Central domain 11 223 214 0,9437
C-terminal 224 553 329 0,5068
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-223
C-terminal
224-553

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP12
[NCBI] 		1923889 Uroviricota > Caudoviricetes > Chimalliviridae > Ripduovirus RP12 >
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAW19123.1 [NCBI]
Genbank nucleotide accession
AP017924 [NCBI]
CDS location
range 146259 -> 147920
strand -
CDS
ATGAACGTTGTAGAAATCGATGGCATTCTGTACATCGATGGCTCTCCTTACAACCTTCAAACACTCGCTCCGCTTGGCGACAACTACAAACAAGGCCCGGCCAGACAGCTCGACGCTCTTGGTACGGATTGGGCATTCCCACCGTTCATGGCACTACAGCGCGCCACCATCTGGTGTCCTGCTAACGGTGTAGTCGCCAATATGACTTCTGATTGTGGCGCTAATAACAGCGACTACATGAACGCTGGTTTGACTGCTAATGGTACTGCTGGATATGTGCCGCTGCAGTCCGGTGAAAACTTCCTCGTCGTGGCGGGCGGTGCTGGCTTGGGCTATACCGGCGGCATGTTCAAGCGCGATCGCGCTACGATGGATGCGCTCGCTGCCATGCCTGGTGTAGGTAGTGGTTCTTACGCCAACCAATCGGGCTGGTACATGCATATGTCCATGTGGCTACCCAACGTCAGCGGTAGCTACCTGATGTGGGCGCAACGCGCAGATGCTTATTCGAATATCGTCGAAAACATACCGGCTGACTTCACAACCGCCCCATCAGTGTATTTCGGTACTTCCATCGGTAATGACTTCAAGATCCGTCAGTGTGTAGGTATTCTTGGTAGTTACGCAGTATTCTTCAGTTCGCTAGCCAATGCTTCTCCGGCCACTGCCGCGAATACTTTGCACGTAGTAAATCGCCAAACCAGAGTAGCTACTGCGGTAAGCACAGCAGTTACTGGCGCGGCGTCGCAGGATCGCGCCGGCAGCGTTGCTTCGGAAATGACCTATACTGGCGCCAGCACGGGTTATTTCTACGCGCCGGAGTCGATTGCCGGTGGCGATAACGTCGCTATTAACGTAGTGTCGGTGGATTGTACTGGTACTCCGACTGCCTCCAATCAAGTGGCAACCATTGATTGGACCAACAATGGCGGTGTGACTGCCTTTACCGCGCTGAGTCGCAACACGTCCAGCGCGCGCAAGATCCGCGCATCCATCATTGACCGCACAGCTACAGCAGGTAAACGCTATCTCTTCGTAATGGTGACTGAACCGACTTCGTCATCCTTCGAAGCTCAAGCAGCTATGAAGGGTCTGCTGTTCGAGATCACCACACCCACCAGTCTGAAGTTCGTACAGTCAATCAGTTTGGCTGACAACGCGCGCGCTAACGGTACGTTGTGGACCAGCGATACCCACGATCGTCTGATCGTGAAGCAAGTTGACCGTATCGCTGTCTATAAGTTTACCGACGGTACTTACTTCGCCAAATTGGCTGAGTACAGCGGTGTTTGGGGCGGCGTGGGTGTGGATAGCACCGAACGCATCTGGATGATTGATGTAACGGCCGGTAACCTGTCTGCACAAGGTCCGTCGCTCTACTACGTGAATCCGGAAAGTATTCCAAATAGCCTGTCGGTTTCATTCGATAGCGGTACGTATCAATTCGCAGGCACTCCGGTAGCTGCGAACCTGAACGTGGATCTCCGCACGGCCGCTGGTGTACGCAAAGCCGGCAACGTGACGATCACGATCACGAGTGGCAATGCGAAGTTCCAAGATGGTACGACGCAAACGACCGTAACCACATTGACTACAGCTACGCTGCAAGTTCCGGTGAACATCATCGGCATTGGTGACGTGGTTATCGAGGCTACGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7625341d0b9fbde206e0e13fac31132b9297d92860a18298f1a3921b3c245327
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two jumbo phages RP12 and RP31 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Yoshikawa,G., Ogata,H. and Yamada,T. 2020 — GenBank