Protein

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Genbank accession
XPP59822.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MADILKPAFRATSGLDAGGEKVINVSKADFNTKTDGVNVEFFIEENTIQEYDSTRGYRKNFAVMFDGRIWTAKEDIAAPAGTFQEPRWTALRTDAKWKYVTSGTNNALKSGDYISVSTETSDVGFVLPNTPQDGDTIVIKDVGGKVGYNSLKVKISNQSIIRFNVPVSEVIITKARAESIFIFSNRQWQFYSYEEDEHAVRVTSAAEHRATAGEHIFRTHANPGLVKVMLPKFANNGDIIYFTDLDGLGPIHHLQLRTFDDSTSIGKAGVHQAEYRTSGDGLVVFDAAEKVWRTWDGDLRTRLRIIRDDVKLMPNESVMVFGTNNSIEKTINVELPLSVALGDKVRIAMNYMRKGQKVVIKAAEGDTIATSKSLLQFPKRSEYPPEVEWVQVTSLTFDGTQDYVPIIELSYIEDGTKHYWVVSTNDPTVERVDSKTDETRKRLGVIALASQTQANVDKENNPEKELAITPETLANRTSTESRRGISRLATTAEVVQDSNFAFLDDVIVTPKKLNQRVATETSRGLAEIATQTETNQGTDDTTIITPKKLEARRATENMAGIAKLVSTVGTTAGVDRATKGTNVYDYDNNTDIVTPKSLAQQKATYTEQGSLFIATANEVISGVSQEGFQTAVTPVELHKKTATETRIGFSELATQAETDAGTDDFRIVTPKKLNDRKAREDLTGLARIATQVEFDAGTLDNVISTPLKVKTHFNDTARTSVVTDSGLVEQGTLWNHYTLDIQEASETQRGTARLATQGEVDTGTDDKTVVTPLKLHKKKATESTEGIVKIATQVETVAGTSSITAVSPKNLKHVIQVEKTWEASPILRGLVKISENAITWEGNNVDGSTKPLENYEKTGYAISPYELNKTLANYLPKMGQAEDSRNLDGLDSSQFIRRDIDQTVNGKLTLTKETTVSAPIVSTSTAKFDSATSVKSVTIGDGTGDAVFNMLGKDNPWNVSSLTSKETLEFKSGDANALVINKNGNLTSAGQIAAPSVDVSKSYKLNGVNVLTSETIGVTPVVSVGSTTQKLVIKTVDAGKIDIYDKDSPSTPYTVLTTKNAVDIVGNNFVKKIGDNMSGRLTVNAAMSIIMDQDKAMLPLSSETIGTWSTEITKKTHYDKLPGYVVPVFVEGEEGGSTGIVERYEEVKSIGTMSQFGVSAAYTYRIWTPRPQVPQDNHNAVSMYMQMWDSARNTWGQWSRMFTSEAPPTAADIGAVSTAGSAFDNLKIHKWLQIGNVRIEPDETTRTVKFTWVDNP
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 137567,55030 Da
isoelectric point:5,47151
aromaticity:0,07006
hydropathy:-0,39387

Domains

Domains [InterPro]
DC_1986
ATT
10–138
DC_1986 DC_1209
IPR048391
ATT
1103–1202
IPR048391
XPP59822.1
1 1256
Architecture
ATT
STR
ATT
STR
ATT 10-138 | STR 343-1102 | ATT 1103-1202 | STR 1203-1244 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP59822.1
1 1256
Domain Start End Length (AA) Confidence
N-terminal 1 1018 1018 0,7939
Central domain 1019 1220 203 0,1031
C-terminal 1221 1256 35 0,7523
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1018
Central
1019-1220
C-terminal
1221-1256

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Gravdalen
[NCBI] 		3374948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP59822.1 [NCBI]
Genbank nucleotide accession
PQ464594 [NCBI]
CDS location
range 152788 -> 156558
strand +
CDS
ATGGCCGATATTTTAAAACCTGCTTTCCGTGCCACGTCCGGCCTTGATGCAGGTGGCGAAAAAGTTATCAACGTTTCTAAAGCTGATTTCAATACAAAAACTGATGGTGTAAACGTTGAATTCTTTATTGAAGAAAACACCATCCAAGAATATGATAGTACTCGTGGATATCGTAAGAATTTTGCAGTGATGTTTGATGGACGTATCTGGACTGCAAAAGAAGATATCGCAGCGCCAGCAGGTACGTTCCAAGAACCTCGTTGGACAGCATTACGTACAGATGCTAAATGGAAGTATGTAACTTCTGGTACTAATAACGCACTTAAATCAGGTGATTACATCTCTGTATCAACCGAAACAAGTGATGTTGGATTTGTTTTACCTAATACTCCACAAGATGGAGACACAATAGTAATTAAAGATGTTGGTGGTAAGGTTGGGTATAACTCATTAAAGGTTAAAATTTCTAACCAATCTATTATCCGTTTTAATGTTCCTGTTTCTGAAGTAATTATTACTAAAGCGCGTGCTGAAAGTATTTTCATTTTTAGTAATAGACAATGGCAATTCTATTCTTATGAAGAAGATGAACATGCTGTTAGAGTAACTTCTGCCGCTGAACATAGAGCAACAGCTGGTGAACATATTTTCCGTACCCATGCAAACCCAGGACTAGTTAAAGTAATGCTGCCTAAGTTTGCTAATAATGGTGACATCATTTATTTTACCGATCTTGATGGATTAGGCCCTATTCATCATTTACAGCTTCGTACTTTTGACGATAGCACAAGTATTGGTAAAGCTGGGGTTCATCAGGCTGAATACCGTACTTCAGGTGATGGTTTAGTTGTATTTGATGCTGCTGAAAAAGTTTGGCGTACTTGGGATGGCGATCTCAGAACTCGTCTTCGTATTATTCGTGATGATGTTAAACTTATGCCTAACGAAAGTGTTATGGTATTCGGCACGAATAATTCTATAGAAAAAACTATTAATGTTGAGCTGCCATTATCAGTTGCATTAGGCGATAAAGTTCGCATTGCTATGAACTATATGCGTAAAGGACAGAAAGTTGTTATTAAAGCGGCTGAAGGCGATACAATAGCTACTTCTAAATCTTTACTTCAATTCCCTAAACGTTCAGAATATCCACCTGAAGTAGAATGGGTACAAGTTACTTCATTAACCTTTGATGGTACTCAGGATTATGTTCCTATTATTGAACTTTCTTATATTGAAGATGGAACTAAACATTATTGGGTAGTTTCAACAAATGACCCAACAGTTGAACGTGTTGATTCTAAAACAGATGAGACTCGTAAACGTTTAGGTGTAATTGCACTGGCAAGCCAGACTCAAGCTAACGTTGATAAAGAAAACAATCCAGAAAAAGAACTTGCTATTACTCCTGAAACTTTAGCAAATCGTACTTCTACCGAATCAAGACGTGGTATTTCTCGTTTAGCTACTACGGCAGAAGTTGTACAGGATTCTAACTTTGCTTTCTTAGATGATGTCATTGTTACTCCTAAAAAACTGAATCAACGTGTTGCTACTGAAACTTCTCGTGGTTTAGCTGAAATAGCTACTCAAACTGAAACCAACCAAGGAACAGATGATACAACCATTATAACGCCAAAGAAATTAGAAGCACGTCGTGCAACTGAAAATATGGCTGGTATCGCTAAACTTGTTTCTACAGTTGGAACTACTGCAGGCGTAGATCGTGCAACCAAAGGAACCAATGTCTACGATTATGACAATAACACTGATATTGTAACTCCTAAGTCCCTGGCACAACAGAAGGCGACTTATACAGAACAGGGTTCATTGTTCATTGCCACAGCTAATGAAGTTATTTCAGGCGTCTCTCAGGAAGGATTCCAGACCGCAGTTACTCCTGTTGAATTACATAAGAAAACTGCTACTGAAACTCGTATTGGATTTAGTGAACTTGCTACGCAAGCAGAAACTGATGCTGGTACTGATGATTTTAGAATTGTTACGCCTAAGAAATTGAATGACCGTAAGGCTCGTGAAGATTTGACTGGTTTGGCAAGAATTGCAACACAAGTTGAATTTGATGCAGGTACTTTAGATAATGTTATTTCAACTCCGTTGAAAGTTAAAACACATTTCAATGATACTGCCCGTACTTCTGTTGTAACCGATAGTGGTTTAGTAGAACAAGGAACTCTCTGGAACCATTATACCCTTGATATCCAAGAAGCATCTGAAACCCAACGTGGCACAGCTCGCCTGGCAACTCAAGGTGAAGTTGATACTGGAACAGATGATAAGACTGTTGTTACACCTTTGAAACTGCATAAGAAGAAAGCAACCGAATCTACTGAAGGTATCGTTAAAATCGCTACCCAAGTTGAAACAGTAGCTGGAACTTCTTCTATTACAGCTGTTTCTCCTAAAAATCTGAAACATGTTATCCAAGTAGAAAAAACTTGGGAAGCATCGCCAATTCTACGTGGGTTAGTTAAGATTTCAGAAAATGCTATCACTTGGGAAGGTAATAATGTAGACGGTTCAACTAAACCTCTTGAAAATTATGAGAAGACTGGCTATGCTATTTCTCCTTATGAATTAAACAAGACTTTAGCGAATTATCTCCCTAAAATGGGTCAAGCCGAAGATTCACGTAATTTAGATGGACTGGATTCATCTCAGTTCATTCGTCGTGATATCGACCAAACGGTTAACGGTAAATTGACTCTTACTAAAGAAACGACAGTTTCGGCTCCTATTGTTTCAACTTCTACAGCGAAGTTTGATTCTGCGACGAGTGTTAAGAGTGTTACTATTGGTGATGGTACAGGTGATGCTGTTTTCAATATGCTAGGTAAAGACAATCCTTGGAATGTTTCTTCATTGACTTCTAAAGAAACCCTGGAATTCAAATCAGGCGATGCCAATGCATTAGTTATCAATAAAAATGGTAACTTGACTTCAGCAGGACAAATTGCCGCTCCTTCAGTAGATGTTTCAAAATCTTATAAGCTGAACGGTGTAAACGTTTTAACTTCAGAAACAATTGGTGTTACCCCAGTCGTTTCAGTTGGTTCAACTACTCAAAAATTAGTTATCAAAACAGTTGATGCTGGAAAAATCGATATCTATGATAAAGATTCTCCATCAACTCCTTACACTGTTCTGACCACTAAAAACGCAGTTGATATTGTTGGCAATAACTTTGTTAAGAAAATTGGTGATAACATGAGTGGACGCTTAACAGTGAACGCTGCAATGTCAATCATCATGGACCAAGACAAAGCCATGCTTCCTTTATCTTCTGAAACAATCGGTACTTGGTCTACTGAAATCACTAAGAAAACTCATTATGACAAATTACCTGGTTATGTTGTCCCAGTATTTGTCGAAGGCGAAGAAGGTGGTTCTACCGGTATAGTTGAGCGCTATGAAGAAGTTAAATCAATAGGGACTATGTCTCAGTTCGGTGTATCTGCAGCATATACTTATCGCATTTGGACTCCTCGTCCACAGGTTCCACAGGATAACCATAATGCGGTTTCAATGTATATGCAGATGTGGGATTCTGCACGTAACACATGGGGTCAATGGTCTCGTATGTTTACTTCAGAGGCGCCTCCTACTGCTGCTGATATCGGTGCTGTTTCTACTGCTGGTTCTGCATTTGATAACTTGAAAATCCATAAATGGCTTCAGATTGGTAATGTTCGTATTGAACCGGACGAAACAACTCGTACTGTTAAATTCACTTGGGTTGATAATCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c17974d8e5a055d2186e86b088956cc59316e022e7edac20a8493efc766d020d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50