Protein

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Genbank accession
XNT20239.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MTITVDDVKLLKSQRLTDEDDGGGRATGQAVVDREINNLFPDISRLDRTIGRINLRKAFAGISSNSAEPYLGAHAIVTRAPADPRVSVLLFNTGSQTDERRDARNAIESFVVPAVSASFELLGNQLQGQRAIACVQREEQRLPEIGEVYQLVFESRSQYVRITDVEARLEQFAHDYGNGNFVNFTRRRLDLSISAPLGATFPGGQVTPGGTTSPKSQVLSTQVADAARYYGISPLAEAVSRGALSLRVKSVYSQLVPSTTRENALVDQLAGYQRRLFAAAGPARTVNLNVANIGSGRSRTFLGTGCAPGSLSLSAGGGVFADDRKGGLRYISGSNWIASGTVDYESGAIEMAASGSGWSGTASATYQPAAAATGEAVTGEIPIELGNRGFVYTLSLSEAPPQPGTLVVSFLALGKWQEIRDQGNGELAGEGTGTVDFATGSVSITLSALPDVGSSLIYAYVGQNDAALTQRTGTSVQARARINRTLPHQGLLPGSYKATFKVGGVERTVLDSGNGSLSGTGGSGQINYADGKVSMELSATPDAGSGIVHTYQQGSVTDSPLAVTSDSTGMCIGTLPGAPLKAGSVRLSWITKRRQAAPTLGADMGTGALPIFESEITVDNSVTDDAAGGWAGRAGTINYETGEFSLKVAGNYVFKEYTYYTDTVDNFGMKKLRLVATDTTLLEGFGGTLSVRAQSRGVEYGEQTDSQTVALVTLDLLPGVAEPILPGSLVFTWAGEVYVDRSGVLYKNINSSTNAGIAVGSVDYAGRTATLNTYGSGAAPTVTLLACLTTNAGFSVTSMTFRTPGAPLRSASLQVTAVRLDTAQIVTTTADANGKLNGAVIKGSVDIVTGIVRLRFTSNLEDTTGASDIPVIPLLLRYNAVVFTSLPLDATLLGLDPVRLPADGRVPVFREGDVMVVAHTAETTVPSPQAGGVLQLGRDQQAEIKVVDANAVELASAGYSVDLERGRVTWANPLVLQDAEGNPLTLPLVVRDRVEHMTLCTEVQVNGELGISSPLPWDLPAGETLASSALSWGDLQARLHHWFTQRTWDIGSPNWTDEPKGDGTTANYNSLAYPPLIANRGAIDAKWALVFNSSTSFSVVEEKLGVIANGTTTTDTAPINPETNTPYFTIRKEGWGSGWAAGNAVRFNTDSCLGPMWIVRTVLSGKGTVEDDEFHLQIRGDAD
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 124661,94260 Da
isoelectric point:5,05091
aromaticity:0,06932
hydropathy:-0,09349

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNT20239.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 650 650 0,8658
Central domain 651 874 225 0,2134
C-terminal 875 1183 308 0,2475
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-650
Central
651-874
C-terminal
875-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp.
[NCBI] 		2729638 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNT20239.1 [NCBI]
Genbank nucleotide accession
OQ658367 [NCBI]
CDS location
range 31079 -> 34630
strand +
CDS
ATGACGATCACCGTCGATGATGTAAAGCTGCTGAAATCCCAGCGCCTCACCGATGAGGACGACGGCGGCGGCCGTGCCACCGGGCAAGCCGTGGTGGATCGCGAGATCAACAACCTGTTTCCCGATATCTCGCGCCTGGACCGGACCATCGGCCGGATCAACCTGCGCAAGGCCTTCGCCGGCATCAGCTCGAATAGCGCCGAGCCGTACCTGGGCGCTCATGCCATCGTCACGCGGGCGCCGGCCGATCCGCGTGTCTCGGTGCTGCTGTTCAACACCGGCAGCCAGACCGATGAGCGCCGCGACGCGCGCAACGCCATCGAGTCCTTCGTGGTGCCGGCCGTGTCTGCCTCGTTCGAACTGCTGGGCAACCAGTTGCAGGGCCAGCGCGCCATCGCTTGCGTGCAGCGCGAAGAACAGCGGCTACCCGAGATTGGCGAGGTCTATCAGTTGGTGTTCGAGTCGCGCTCGCAGTATGTCCGCATCACCGACGTCGAGGCGCGGCTCGAACAGTTCGCCCACGACTACGGCAACGGCAACTTCGTGAACTTCACCCGGCGCCGGCTGGACCTGTCGATCAGCGCACCACTGGGCGCGACCTTCCCCGGCGGCCAGGTGACTCCAGGCGGTACCACCAGCCCGAAAAGCCAGGTGCTCAGCACCCAGGTCGCCGATGCCGCGCGGTACTACGGCATCAGCCCCCTGGCCGAGGCTGTCAGCCGCGGCGCGCTGAGCCTGCGGGTCAAGTCGGTCTATTCCCAGCTGGTGCCCAGCACCACCCGGGAGAACGCGCTGGTCGACCAACTGGCCGGCTACCAGCGGCGCCTGTTCGCTGCGGCCGGGCCGGCGCGGACGGTCAACCTGAATGTCGCGAACATAGGCAGCGGCAGGTCGCGGACGTTCCTCGGCACCGGCTGCGCGCCGGGTTCGCTGTCGCTGAGCGCCGGCGGCGGTGTGTTCGCCGACGACCGCAAGGGCGGCCTGCGCTACATCAGCGGTTCGAACTGGATTGCCAGCGGTACCGTCGACTACGAGAGCGGCGCAATCGAGATGGCGGCCTCCGGCAGCGGCTGGAGCGGGACAGCGAGCGCCACCTACCAGCCTGCCGCGGCGGCGACGGGCGAAGCGGTGACCGGGGAGATCCCTATCGAACTGGGCAACCGCGGCTTCGTCTACACCCTGTCGCTGTCCGAAGCGCCGCCCCAGCCGGGCACCCTGGTGGTCTCGTTCCTCGCCCTGGGCAAATGGCAGGAGATCCGCGACCAGGGCAACGGCGAATTGGCCGGGGAAGGCACCGGCACGGTGGACTTCGCGACCGGCTCGGTATCCATCACCCTGAGCGCGCTGCCGGACGTGGGGAGTTCGCTGATCTACGCCTACGTCGGGCAGAACGATGCGGCGCTGACCCAGCGCACCGGCACCAGCGTGCAGGCGCGCGCGCGGATCAACCGGACGTTGCCGCACCAGGGGCTGTTGCCCGGCTCCTACAAGGCGACGTTCAAGGTCGGCGGGGTAGAGCGCACTGTGCTCGATAGCGGCAACGGCTCGCTCAGCGGTACCGGTGGCAGCGGCCAGATCAACTATGCCGACGGCAAGGTCAGCATGGAATTGAGCGCCACCCCGGATGCCGGGAGTGGGATCGTGCATACCTACCAGCAGGGCAGCGTGACCGACAGCCCGTTGGCGGTGACCTCCGACAGCACCGGCATGTGCATCGGCACGCTGCCCGGGGCGCCGCTCAAGGCGGGCAGCGTGCGCCTATCGTGGATCACCAAGCGTCGCCAGGCGGCACCGACCCTCGGTGCTGACATGGGCACCGGGGCGCTGCCGATCTTCGAATCGGAGATCACCGTGGACAACTCGGTGACCGACGACGCCGCCGGCGGCTGGGCCGGGCGCGCCGGGACGATCAACTACGAGACCGGCGAGTTCAGCCTGAAGGTGGCCGGCAACTACGTGTTCAAGGAGTACACCTACTACACCGACACGGTCGACAACTTCGGCATGAAGAAGCTGCGTCTGGTGGCCACCGATACCACGTTGCTGGAGGGGTTCGGCGGCACGCTGAGCGTGCGCGCGCAGAGCCGCGGCGTCGAGTACGGCGAGCAGACCGATTCGCAGACCGTCGCTCTGGTGACCCTGGACCTGTTGCCTGGTGTGGCCGAGCCGATCCTGCCGGGCTCGCTGGTGTTCACCTGGGCCGGCGAGGTCTACGTCGATCGCTCCGGTGTGCTCTACAAGAACATCAACAGCAGCACCAACGCCGGCATCGCCGTCGGCTCGGTGGACTACGCCGGCCGTACCGCGACGCTGAATACCTATGGCTCGGGGGCGGCTCCGACGGTCACGCTGCTGGCCTGCCTGACCACCAACGCCGGCTTCAGCGTCACCAGCATGACCTTCCGCACGCCGGGGGCGCCGCTGCGTTCTGCGAGCCTGCAGGTGACGGCGGTTCGCCTGGATACCGCGCAGATCGTGACCACCACGGCGGACGCGAACGGTAAGCTCAATGGCGCGGTGATCAAGGGTAGCGTCGATATCGTGACCGGCATCGTCCGGCTGCGCTTCACCAGCAATCTGGAGGACACCACTGGGGCCAGCGATATCCCGGTGATTCCGCTGCTGCTGCGCTACAACGCGGTCGTCTTCACCTCGCTGCCGCTGGACGCCACCCTGCTGGGCCTGGACCCGGTGCGACTGCCGGCGGACGGGCGGGTGCCAGTGTTCCGCGAGGGTGACGTGATGGTGGTTGCCCATACCGCCGAGACCACGGTGCCGAGTCCTCAAGCTGGCGGCGTGCTGCAACTCGGCCGCGACCAGCAGGCCGAGATCAAGGTGGTGGACGCCAACGCGGTGGAACTGGCTTCGGCAGGCTACAGCGTCGATCTGGAGCGCGGCCGGGTGACCTGGGCGAACCCGCTGGTTCTACAGGATGCCGAGGGCAACCCGCTGACCCTACCGCTGGTGGTGCGTGACCGGGTTGAGCACATGACCCTCTGCACCGAGGTTCAGGTGAACGGCGAGCTGGGAATCTCCTCGCCGCTGCCCTGGGATCTGCCGGCGGGCGAAACGCTGGCGTCCAGTGCGCTGAGCTGGGGCGACCTGCAGGCGCGGCTGCATCACTGGTTCACCCAGCGGACCTGGGATATCGGCTCGCCGAACTGGACCGACGAGCCGAAGGGCGACGGGACCACCGCCAACTACAACAGCCTCGCCTATCCACCGCTGATCGCCAACCGCGGTGCGATCGATGCGAAGTGGGCGCTGGTGTTCAACTCCTCGACCAGTTTCAGCGTGGTGGAGGAGAAGCTGGGGGTCATCGCCAACGGCACTACCACCACCGACACGGCGCCGATCAACCCGGAGACGAACACGCCGTACTTCACCATCCGCAAGGAAGGCTGGGGCAGTGGCTGGGCGGCCGGCAACGCAGTGCGCTTCAACACCGACTCGTGCCTGGGGCCGATGTGGATCGTGCGGACGGTACTCAGCGGCAAGGGCACCGTCGAGGACGATGAATTCCACCTGCAGATCAGAGGAGACGCGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac877708dc85240bbb9cd9568f3d4dc9bf0729b108eaac96855b835d4bc5dc7a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2795
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50