Protein

View in Explore
Genbank accession
QCW22889.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSNILTNNINPRSGNKITIGGVNDRVSIAGTLTYEDVTSVDSVGVITARQGVVIGTGTSIGNPANNELGLYTNSSERLRIDSSGRLLVGVTSGRTFASFAPGGGNLQVEGTVYQNSSMSLTNNQNGSDGGYLLFGKSRGTSVGSSTIVANDDQLGALWFSGADGSQLARGAEIVAAVDGTPGADDMPGRLVFKTSADGSITPTERMRIDSSGRMLIGTATARSNFYDSTNSPYIQLEGADNNSSGIALIQNYDADTLGAALVLAKNNSQTKGTNVLVDINDTCGQISFQGNDGTHFIEAARIAAQIDDTPGANDMPGRLVFYTTNNNGTGAAERMRLTHTSDPTLLIGCTSNSSADDDGVKIRGSSSSTVDVVINAASNINLNHVYNVNATNNGYRYYLSADGGIRNFSSNNSNISDEREKKNIETLDSTWSCLKNWELKKFHYNGQADTEDKKYGVIAQQVAPHCPEVISDWVTQKASDAVLDADGNIVTPAKEEIVRMGVKEQQMMWMAIRALQEAQTRIETLEAQVAELQDN
Physico‐chemical
properties
protein length:535 AA
molecular weight: 56850,93430 Da
isoelectric point:4,72715
aromaticity:0,05607
hydropathy:-0,36710

Domains

Domains [InterPro]
DC_0759
STR
4–509
DC_0759
IPR030392
CHP
416–529
IPR030392
IPR030392
CHP
416–469
IPR030392 DC_1429
IPR036388
RBD
416–528
IPR036388
Coil
Unmapped
508–535
Coil
QCW22889.1
1 535
Architecture
STR
RBD
STR 4-509 | RBD 510-535
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW22889.1
1 535
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5265
Central domain 11 205 196 0,0993
C-terminal 206 535 329 0,9688
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-535

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW22889.1 [NCBI]
Genbank nucleotide accession
MK799832.1 [NCBI]
CDS location
range 60944 -> 62551
strand +
CDS
ATGTCAAATATTCTCACTAATAATATTAACCCTAGAAGTGGTAATAAGATTACTATTGGTGGGGTTAATGACAGAGTATCTATTGCTGGTACTCTGACTTATGAAGATGTCACCAGTGTAGATTCTGTTGGTGTCATTACTGCAAGACAAGGTGTAGTAATTGGTACAGGGACATCTATTGGTAATCCTGCTAATAATGAGTTAGGTTTATATACAAATTCTTCAGAGCGTCTACGCATCGACAGCAGCGGCAGGTTGTTGGTTGGAGTAACAAGCGGCAGAACGTTTGCCTCATTTGCTCCTGGTGGTGGAAATTTACAAGTTGAGGGAACTGTTTATCAAAATTCGTCTATGAGTTTGACGAACAATCAAAATGGAAGCGACGGCGGTTATTTGTTGTTTGGAAAAAGTAGAGGTACATCAGTCGGCTCAAGTACAATTGTTGCTAATGATGATCAGTTAGGTGCCCTTTGGTTTTCAGGTGCAGACGGATCACAGCTAGCAAGAGGGGCAGAAATTGTAGCGGCTGTAGATGGAACGCCGGGCGCTGACGACATGCCAGGCCGTTTGGTATTTAAAACCAGCGCCGACGGCTCTATTACCCCGACAGAAAGGATGCGCATCGACAGCTCTGGCCGCATGTTGATTGGTACGGCTACTGCGCGTAGCAATTTCTATGATTCAACTAATTCCCCTTATATTCAACTTGAAGGAGCTGATAACAATAGTTCAGGTATAGCACTTATTCAAAATTATGACGCAGATACTTTAGGGGCTGCACTTGTACTGGCAAAAAACAACTCCCAAACAAAAGGGACAAATGTACTGGTTGATATCAATGACACATGTGGCCAAATCAGTTTCCAAGGCAATGATGGTACGCACTTCATAGAGGCTGCACGTATTGCCGCTCAGATAGACGACACCCCTGGCGCTAATGATATGCCAGGTCGTTTAGTGTTTTATACCACCAATAATAATGGCACTGGTGCGGCAGAACGGATGAGACTTACTCATACCTCAGACCCCACATTGCTTATTGGATGTACAAGCAACAGCAGCGCCGATGACGACGGTGTTAAAATTAGAGGATCCAGTTCTTCAACTGTAGACGTAGTTATAAACGCAGCATCAAATATCAATCTTAATCATGTTTACAACGTAAACGCCACAAACAATGGCTATAGATATTATTTGTCCGCAGATGGTGGTATTAGAAATTTTTCTTCTAATAATAGTAACATTTCCGATGAACGTGAAAAGAAAAACATTGAAACACTTGACAGTACTTGGAGTTGTCTAAAAAACTGGGAACTCAAAAAGTTCCACTATAATGGACAAGCAGATACAGAGGACAAAAAGTATGGTGTTATAGCACAACAAGTTGCTCCACACTGTCCAGAAGTAATTAGTGATTGGGTCACACAAAAAGCATCAGATGCTGTTCTTGATGCTGATGGCAACATCGTTACTCCTGCCAAAGAAGAAATCGTCCGTATGGGTGTTAAAGAACAACAGATGATGTGGATGGCAATCAGGGCCCTTCAAGAAGCACAGACTAGAATTGAAACCCTGGAAGCTCAGGTTGCAGAACTTCAAGATAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
984a1b675fbe6822a6cb16a53b1892ec4e5aa18215755fa43b88d5a452020544
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7459
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank