Protein

View in Explore
Genbank accession
AUR89054.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MSVKSRGTGIPLRGGGGGGGAIAVGNTDCDVTNQVNAQVSSLVIGDGLGFVAYQDPDNVGCVIIGAPPNFLPPFPHGVTTRANQPVRVGAPVNNEFFAGNNWQGTHRQATQMNTITWASGQCTGFGDASSMRVTVTNADGITYQQTTFPTAGNSDTTTDRIRMQVTGTTPDGDGSRDAATVRMTVDLLGLLTDHGVGHTSGSFVVSFLHTDFDGTTRTWSEAFFLDDSNNAEISLDADATGAREFHIENVNHASSHATIKYLSGIGYYTTGTQYILSSGTVHRHNLDSSRVNDSYVLDMDGFGVADYNTSPWTSAGDFQYMHPAPDRDRFDNQMAFIPDVTTNTINRANFRHIGATQALLNVRDAWGSSPQYASQSFNMLVDTFLDDSTALIETFNGEAGWRLEGDYTTAWDSELIRADGHGIVFGGGLYRGVDLPTIDENVLGGVGSLGDASAFFPANLEDNTVRVQPNYSGHTQAGVFFREFRATNPATSYANMSFTITTSNGLAADLASGGLRIYLWKLGSSAPSSPNLTLPPAYDPTDATASQVNSIWVHETYNFASFDDGATQSAATSGAQVNLTGSTVTVSFGGANVDTGVLARIEVDSSTTISHIVAAF
Physico‐chemical
properties
protein length:616 AA
molecular weight: 65346,67610 Da
isoelectric point:4,59278
aromaticity:0,09416
hydropathy:-0,22256

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR89054.1
1 616
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,5179
Central domain 50 248 200 0,1628
C-terminal 249 616 367 0,8250
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-248
C-terminal
249-616

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.121.O._10N.286.46.C4
[NCBI] 		2070726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89054.1 [NCBI]
Genbank nucleotide accession
MG592495 [NCBI]
CDS location
range 13721 -> 15571
strand +
CDS
ATGAGTGTCAAATCTAGAGGCACGGGGATACCCCTTCGTGGGGGTGGTGGTGGCGGTGGAGCTATTGCTGTAGGTAACACCGATTGTGATGTCACTAACCAAGTCAACGCTCAAGTAAGTTCCTTAGTTATAGGGGATGGTCTTGGGTTTGTAGCCTATCAGGATCCTGATAATGTTGGGTGTGTAATCATTGGCGCTCCACCTAACTTTCTTCCGCCATTCCCGCACGGAGTTACTACAAGAGCTAACCAACCTGTTCGTGTAGGTGCTCCAGTAAACAATGAATTCTTTGCAGGTAATAACTGGCAAGGTACTCATCGCCAAGCGACTCAAATGAACACTATCACTTGGGCAAGTGGGCAGTGTACTGGTTTTGGTGATGCATCTTCAATGCGTGTTACCGTGACCAACGCTGATGGAATTACCTACCAACAAACGACCTTCCCTACCGCAGGTAATAGTGATACTACAACTGATCGTATTCGTATGCAGGTAACAGGGACTACTCCTGATGGAGATGGTAGTCGAGATGCAGCCACTGTTCGTATGACTGTAGATCTATTAGGGTTACTTACTGATCATGGTGTTGGACATACCTCTGGCTCTTTTGTTGTATCCTTCCTTCATACTGATTTTGATGGAACGACTCGTACTTGGTCAGAAGCTTTCTTCTTGGATGATAGTAATAACGCTGAAATTAGCCTAGATGCCGATGCTACAGGTGCAAGGGAGTTTCATATTGAAAATGTGAACCACGCCTCTAGTCACGCAACGATCAAGTACTTATCAGGTATCGGTTACTACACAACAGGTACACAGTATATCTTATCCTCTGGTACTGTACACAGGCACAACCTAGATAGTAGTAGGGTGAACGATAGTTATGTACTTGATATGGATGGTTTTGGAGTAGCTGATTACAATACCTCTCCTTGGACATCGGCAGGGGATTTCCAATACATGCACCCTGCACCTGATCGGGATAGGTTTGATAATCAAATGGCATTCATACCGGATGTGACTACTAATACTATCAACCGAGCAAACTTTCGTCATATCGGGGCGACACAAGCATTACTGAATGTACGCGATGCTTGGGGTAGTAGTCCACAGTATGCATCTCAGAGCTTCAACATGCTGGTAGATACCTTCCTTGATGACAGTACTGCGTTGATTGAGACATTCAACGGAGAAGCGGGATGGAGATTGGAAGGAGATTACACTACTGCTTGGGATAGTGAACTTATTCGCGCAGATGGGCATGGCATTGTGTTTGGAGGTGGTTTATACCGAGGTGTAGATCTACCGACTATCGATGAGAATGTGTTAGGCGGTGTAGGTAGTTTAGGAGATGCTTCAGCATTCTTCCCTGCCAACTTAGAAGATAACACAGTAAGAGTGCAACCCAATTACTCAGGACATACACAAGCAGGGGTATTCTTCAGGGAATTCCGAGCAACTAATCCTGCAACAAGTTACGCTAATATGTCATTCACTATTACAACAAGTAACGGACTTGCTGCTGACTTAGCGAGTGGTGGGTTGAGGATTTACCTATGGAAACTAGGTTCATCTGCACCTTCATCACCTAACCTTACCTTGCCACCTGCTTATGACCCTACAGATGCTACAGCTAGTCAGGTTAATAGCATTTGGGTACATGAGACTTATAACTTTGCAAGCTTTGATGATGGTGCCACCCAATCCGCAGCTACAAGTGGTGCTCAAGTTAACCTAACAGGTTCTACAGTTACAGTATCCTTCGGAGGAGCTAACGTAGATACAGGGGTTTTAGCTCGAATAGAAGTTGATAGTAGTACTACAATTAGTCATATTGTTGCTGCATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3c8dd9e00126a003ac607fa0ed32abfff37dceb26151fe9df55998ebc39952f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank