Protein

View in Explore
Genbank accession
YP_010742349.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAGILIDYNDGRPVMEITAGLRAPSFCTSFYQRCQSDKTLTINTQLTPGSDLVVALTSPVEVIEVFDQTLVLPDPFYVTSVQRNGDGGITLRGEDAYGAYSGLPTWGGVIMEVLPVGSRNAGLLVANSTDFTAISNVSRLMTCQYAQRVWVNGSMPLPVGGVPFARWDDGNVSVGFDGGSIIVRNASYGGIDDVGAAVEMDLVIFNNTPPTPGNGITMTNNQGQVTFSTVNKPFVYDRLIYIGGGDQYIGNSLVQLSYTGALIENNGGYNHVRMNGIRMAGGNVRIAKNRVIGNYSRQQFQMPGKNIAVPTPLLVIPNIY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34405,64010 Da
isoelectric point:5,02828
aromaticity:0,08723
hydropathy:0,01931

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
YP_010742349.1
1 321
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010742349.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,8742
Central domain 13 211 200 0,0082
C-terminal 212 321 109 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_011D5
[NCBI] 		2735301 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010742349.1 [NCBI]
Genbank nucleotide accession
NC_073085 [NCBI]
CDS location
range 37679 -> 38644
strand -
CDS
ATGGGCGCTGGAATACTTATAGACTACAACGACGGAAGGCCGGTGATGGAGATAACAGCCGGACTTCGCGCTCCGTCATTCTGTACCTCATTCTATCAGCGCTGCCAGTCTGATAAGACGCTTACTATTAACACTCAGCTAACGCCAGGGTCAGATCTGGTCGTCGCGCTCACAAGCCCCGTTGAAGTTATAGAAGTATTCGACCAGACACTGGTCTTGCCCGACCCTTTCTACGTCACCTCAGTACAACGTAACGGGGATGGCGGAATCACCTTGCGAGGTGAAGACGCATATGGCGCATATAGCGGGCTTCCAACATGGGGCGGGGTGATCATGGAAGTGTTGCCGGTGGGTTCGCGCAACGCAGGGTTACTGGTGGCGAACTCGACGGACTTTACCGCCATATCAAATGTATCCAGGCTAATGACCTGCCAATATGCGCAGCGCGTGTGGGTGAACGGAAGTATGCCGTTACCTGTAGGCGGTGTCCCATTCGCGCGCTGGGACGACGGAAACGTGTCGGTCGGCTTCGATGGCGGAAGTATTATCGTCCGTAATGCGTCCTATGGTGGGATTGACGACGTAGGCGCTGCCGTTGAAATGGACCTGGTTATATTCAACAATACGCCACCCACCCCCGGAAACGGCATCACCATGACAAACAACCAGGGTCAGGTCACGTTCTCAACAGTGAATAAGCCATTTGTTTATGACCGCCTTATCTATATCGGCGGCGGCGATCAGTACATAGGCAATAGCCTGGTCCAGCTTTCGTATACCGGCGCGCTCATTGAGAACAACGGCGGCTACAATCACGTTCGAATGAACGGGATTCGAATGGCAGGCGGTAATGTGCGCATCGCCAAAAACCGGGTAATCGGCAACTATTCACGGCAGCAATTCCAAATGCCGGGTAAAAACATTGCAGTACCCACCCCGTTACTCGTAATTCCTAACATCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
69d52175f382e2d8c96ef8e12ce3c9da025ea0d87916e86cecc2b936b1adee46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8150
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50