Protein

View in Explore
Genbank accession
QQV88626.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAYAQRGQVVNLPLVFGDGRSRNNFDWITRLPENMLAIARAIKGGNGYMRMMPGLKKVADVAGLSRGVEWNTVSSSAYRVMGGKLYNNGNPIADVSGEDRTPMAHSRDSQGVVSQNQLLLYRYDGTRKTFSNWPRDSGTGVDNPQFTWGDINDVCHLRQRYIFSVKNSDTFWISSLEDESHPDKTAPFYRAESMPDGIVAIRSWRDYVLCFGTASIEFFGLTGDAQNVYASQPSYTVEAGTLGRETVCQYLDSFAFLTSPFVGEFTIAMMNPGGGAWSDLASVQIKKVLAGYTVAQLQNTRLESVTFESHKLLVVHLPDQTLVYDHPVSQAQGVPVWSIIKTGVQNASGPHRAIDYCNEGNRVTVGDKRLAVLGEFDMTTCAQYGEDQEIVLYTPLMPFQGMMLSNFEIDASVGGDSVTSRMWISSTEDGSVFGQEILIDYNTPQQWLKRVVLNKIGRCRTAAAFKIRTVGATPATLSRARVRVS
Physico‐chemical
properties
protein length:486 AA
molecular weight: 53702,05460 Da
isoelectric point:6,41032
aromaticity:0,09877
hydropathy:-0,23724

Domains

Domains [InterPro]
IPR021098
STR
12–485
IPR021098
QQV88626.1
1 486
Architecture
STR
STR 12-485 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV88626.1
1 486
Domain Start End Length (AA) Confidence
N-terminal 1 91 91 0,6842
Central domain 92 290 200 0,0569
C-terminal 291 486 195 0,5449
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-91
Central
92-290
C-terminal
291-486

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia phage Kc237
[NCBI] 		2801382 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV88626.1 [NCBI]
Genbank nucleotide accession
MW258710 [NCBI]
CDS location
range 26576 -> 28036
strand -
CDS
ATGGGAGCTTACGCACAACGCGGGCAGGTCGTGAATCTGCCCCTTGTTTTTGGGGATGGCCGCAGCCGCAATAACTTCGACTGGATCACCCGCTTGCCGGAGAACATGCTGGCGATCGCGCGCGCCATTAAGGGCGGCAACGGCTATATGCGCATGATGCCCGGCCTTAAGAAGGTCGCGGACGTGGCGGGTCTCTCTCGCGGCGTCGAGTGGAATACGGTCTCCAGCTCGGCCTATAGGGTGATGGGCGGCAAGCTGTACAACAACGGCAACCCGATCGCCGACGTCAGCGGCGAGGACCGCACCCCTATGGCGCATAGCCGCGACAGCCAGGGCGTCGTCTCGCAGAATCAGCTTTTACTCTACCGCTACGACGGAACCCGCAAGACGTTTAGCAACTGGCCGAGGGACTCCGGGACGGGCGTCGATAACCCCCAGTTTACGTGGGGCGATATCAACGACGTTTGCCACCTGCGCCAGCGCTACATTTTCAGCGTCAAAAACTCGGACACCTTCTGGATCTCCTCTCTGGAGGACGAGAGCCACCCGGACAAAACCGCGCCTTTCTACCGGGCTGAATCCATGCCGGACGGCATCGTGGCGATCCGCTCGTGGCGTGATTACGTGCTTTGTTTCGGGACCGCCTCGATCGAGTTTTTCGGCCTGACCGGGGACGCGCAGAACGTCTACGCCAGCCAGCCCTCCTACACCGTCGAGGCCGGGACGCTGGGTCGTGAAACGGTGTGCCAGTACCTCGACAGCTTCGCGTTTCTCACGTCGCCTTTCGTGGGCGAGTTCACGATCGCCATGATGAACCCCGGCGGCGGCGCATGGTCTGATCTGGCATCGGTCCAGATTAAGAAGGTCCTCGCCGGGTACACCGTGGCGCAGTTGCAGAACACCCGACTGGAGTCCGTGACCTTTGAAAGCCATAAACTGCTTGTTGTCCACCTACCGGACCAGACGCTCGTCTACGATCATCCCGTTAGCCAGGCGCAAGGCGTCCCGGTATGGTCGATTATTAAAACGGGCGTACAGAACGCCAGCGGCCCGCACCGCGCGATCGACTACTGCAACGAGGGGAACCGCGTCACGGTAGGCGACAAGCGTCTGGCCGTGCTGGGCGAGTTCGACATGACCACCTGCGCCCAGTATGGCGAGGACCAGGAGATCGTCCTGTATACGCCGCTGATGCCGTTCCAGGGCATGATGTTATCCAACTTCGAGATCGATGCCAGCGTAGGCGGCGACAGCGTAACGAGCCGGATGTGGATCAGCAGCACGGAGGACGGTAGCGTGTTCGGGCAGGAGATCCTGATCGACTACAACACGCCGCAGCAGTGGCTAAAACGCGTCGTGCTCAACAAGATCGGGCGCTGCCGTACCGCTGCCGCGTTTAAGATCCGCACCGTAGGCGCAACCCCGGCGACGCTCTCCCGCGCGCGCGTCCGGGTCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cce2b3868b631a3c34d0fb7f75d4ba965130f409c7981e13d4cf0edc7d75fe6f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank