Protein

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Genbank accession
YP_009889342.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKLSFFDSKGDGWHYVPNNDFYDSEALGLISNNPAEGVNNSKKLQKIMDKFNRIDFTNGDYYFKWWQYQTTGGEPCCVLLGKGAKIFTHKDARIIQQTNDVIGQTTPEHPFLFNGKAIDGSVSDIEINARYHQEGIAGLFVFRRVDRIHLHDCVITGGYFDGNLAEWGSRTTLSMLGCSDYLIDNVKFYARDTNSDYSVLNANFPGFAIRANTGFVEPANQTYTSERGKITRCKFHGYIYNATEIAGTGTKYIELSFNDYIDCALTPIDFDKGVYRCSALYNRVIRLKRGPAFASDGGTDWIPMRAQGYITGSFTLESIGCRFIGNEVIDTGSDVNIGTDAPNFILCSNAPGTIIQNNRGTNSYFGQAHLINNSQNVIVDGTVLTCLSAFYDGNNNSAGLVVRDSKFDTYRRAIDIANAGNKFNGMTDFRFSNCEFNYVGGTAFGYDGVYLENTGVANTGMFINCRFKAYNRPYVVASSSGHKVLFKGIVGVNCQTDPVVITGSPSVEYTSMTGI
Physico‐chemical
properties
protein length:515 AA
molecular weight: 56968,07210 Da
isoelectric point:6,01626
aromaticity:0,12816
hydropathy:-0,26058

Domains

Domains [InterPro]
IPR011050
STR
40–270
IPR011050
IPR011050
STR
268–504
IPR011050
IPR011050
STR
268–495
IPR011050
YP_009889342.1
1 515
Architecture
STR
STR 40-504 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009889342.1
1 515
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,9638
Central domain 37 504 469 0,9961
C-terminal 505 515 10 0,1678
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-504
C-terminal
505-515

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage P46FS4
[NCBI] 		2712940 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae > Agtrevirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009889342.1 [NCBI]
Genbank nucleotide accession
NC_049509.1 [NCBI]
CDS location
range 2963 -> 4510
strand +
CDS
ATGAAATTAAGTTTTTTTGATTCCAAAGGTGATGGTTGGCATTATGTTCCCAACAATGACTTCTATGATTCGGAAGCCCTTGGTTTGATCTCAAACAATCCCGCAGAAGGGGTTAACAACTCCAAGAAGCTGCAAAAGATAATGGATAAATTTAATCGAATAGACTTTACAAATGGAGACTATTATTTCAAATGGTGGCAATACCAGACAACAGGCGGGGAGCCTTGTTGTGTTCTTCTTGGAAAAGGTGCCAAGATCTTTACGCACAAAGACGCCCGGATTATTCAGCAGACCAATGATGTTATTGGGCAGACCACTCCAGAACACCCGTTCCTTTTCAACGGCAAAGCGATCGATGGTTCTGTCAGTGATATCGAGATAAATGCAAGATATCACCAGGAAGGAATTGCAGGACTCTTTGTGTTCCGTCGTGTCGATCGTATTCATTTACACGACTGTGTGATCACTGGCGGTTATTTTGATGGGAACCTTGCAGAATGGGGTTCGCGCACGACTTTGTCTATGCTGGGGTGCAGCGACTATCTTATCGATAATGTCAAATTCTACGCCCGAGACACAAACTCAGATTATTCTGTTCTGAACGCGAATTTCCCTGGGTTTGCTATTCGTGCTAACACTGGATTTGTAGAACCTGCTAACCAAACATATACCAGTGAGCGCGGTAAAATCACTCGTTGTAAATTCCATGGATACATTTATAATGCAACCGAAATCGCTGGCACTGGGACGAAATATATTGAATTGTCCTTCAACGATTACATCGATTGCGCCCTGACTCCAATTGATTTTGACAAAGGAGTGTATCGTTGTTCTGCCCTGTATAATCGGGTTATACGCCTGAAACGCGGACCAGCATTTGCGTCAGATGGTGGCACAGATTGGATACCAATGCGTGCCCAAGGTTACATTACTGGTTCATTTACTCTTGAATCTATTGGTTGTCGGTTTATTGGAAACGAAGTGATAGACACGGGAAGTGACGTGAACATTGGCACTGACGCTCCGAATTTCATTCTTTGTTCTAATGCTCCTGGAACTATCATACAAAACAACCGTGGGACCAACAGTTATTTTGGTCAGGCGCATCTGATTAATAACAGTCAGAACGTTATTGTTGACGGCACGGTGTTAACATGCCTCAGTGCATTCTACGATGGGAATAACAACAGTGCTGGTCTTGTGGTTCGCGATAGTAAATTCGATACCTATCGTCGGGCGATTGATATTGCCAACGCTGGCAATAAATTTAATGGTATGACAGATTTCCGGTTTAGTAATTGCGAGTTCAATTATGTCGGGGGAACTGCATTTGGTTATGATGGGGTTTACCTTGAAAATACAGGCGTTGCCAACACTGGTATGTTTATTAATTGCCGATTTAAGGCATACAACAGACCATATGTCGTGGCCAGTTCGTCTGGCCATAAAGTTCTGTTTAAAGGTATTGTCGGCGTCAATTGTCAGACAGATCCGGTGGTTATCACTGGTTCTCCAAGCGTCGAATACACGTCCATGACCGGAATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
eab1957d02ceab932f65142efe1c364871f87f82e7236688064f1231f580ca06
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7849
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50