Protein

View in Explore
Genbank accession
QBX24244.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSETISAIVVHKSMTKNEWESSDIILPQGQLVYESDTGHSKFGDGKNRYADLIYQGGPPGAQGPQGPAGETGPQGPPGPTGQRGETGPQGPPGPQGPPGADGKMTFEQLTPEQKQQLKGAGIQSISLDYEGYLTIQLDNGQSFRSDISLKGPQGEPGINGMDGPRGATGPQGPAGDPASIPDDVVRRGELAAYLLKSEYKAKGAGSGLSYKVVTQSEYDDLYDYSDNELILVTEG
Physico‐chemical
properties
protein length:235 AA
molecular weight: 24622,73440 Da
isoelectric point:4,51827
aromaticity:0,06383
hydropathy:-0,74596

Domains

Domains [InterPro]
SSF69349
STR
7–235
SSF69349
PTHR24637
Unmapped
55–177
PTHR24637
IPR008160
STR
57–103
IPR008160 G3DSA:1.20.5.320
G3DSA:1.20.5.320
STR
75–128
G3DSA:1.20.5.320
QBX24244.1
1 235
Architecture
STR
STR 7-235
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan180
[NCBI] 		2548028 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equi
[NCBI] 		1336 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24244.1 [NCBI]
Genbank nucleotide accession
MK448864.1 [NCBI]
CDS location
range 22395 -> 23102
strand +
CDS
ATGTCAGAGACTATATCAGCTATAGTTGTGCATAAAAGCATGACAAAAAACGAGTGGGAGTCTAGTGACATCATTTTGCCACAAGGCCAGCTTGTCTATGAGTCTGACACAGGCCATAGTAAATTTGGCGACGGTAAAAATAGATATGCAGATTTGATCTATCAAGGTGGACCACCTGGGGCACAAGGTCCCCAAGGGCCAGCTGGCGAAACCGGTCCACAAGGCCCACCAGGCCCTACTGGTCAACGTGGGGAAACAGGCCCACAGGGTCCACCTGGGCCACAAGGGCCGCCAGGAGCGGACGGTAAAATGACGTTTGAGCAGCTCACACCAGAGCAAAAACAGCAGCTTAAAGGTGCTGGCATACAAAGCATATCATTGGATTATGAGGGCTATTTGACAATACAGCTAGATAATGGCCAATCGTTTAGATCAGATATTAGCTTAAAAGGTCCTCAAGGAGAGCCGGGGATCAATGGTATGGACGGTCCAAGAGGCGCAACGGGTCCCCAAGGACCAGCTGGTGATCCGGCGAGCATACCTGACGATGTTGTCAGACGTGGTGAGTTAGCTGCATATTTGCTTAAATCAGAGTATAAAGCCAAAGGCGCAGGCTCTGGGCTAAGCTACAAAGTTGTCACTCAATCAGAGTATGATGATCTGTATGATTACAGCGACAATGAGTTGATACTCGTGACGGAGGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
90b9419fb26af82362ecc564134ba727c0bc42a64218408187c561e474394905
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank