Protein

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Genbank accession
QQO91238.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSIPISDLVQVDIAISPNAIATDGFGPLLFMSKEFVPTVDVYPVRSYTSLKEVLADFPGGEIAKAATSWYSQKPTPKTFLVGAIKYDTLTPATPATVTAATAAVLATIKLETAATMQLSVSGVQYVTDPIDFSSAADFDEVATLVTTALSSVGAGVTVTQDAGKFKLTTSATGINATISNVGGKVGEVLKLQSSDSAVIVAGKNELSISSDLSNIADAPFNFFYVGLDRQYRGKTSPVDNQMSVAKWCEASSKVFGWGDNDKNILINGTDNSFRRAKNQNLRNTLCVYDASANGDEYPEISILGRASTVNFNVANSVLILAYKKGPGISTADLSSGQVSALLSCGGNAFISVAGNVMFYNGRMADGTWFDSVQGVEWLTQKVRLNVFNLFYTSTTKIPWTDTGVAMVNQQVTLALELAKTNGLIAPGYDNEGVFYPEGYKVISTPLELLQSQKGERIWEGTSFIAIGSGAIQGAVISGNFIQ
Physico‐chemical
properties
protein length:482 AA
molecular weight: 51121,17610 Da
isoelectric point:4,81377
aromaticity:0,09129
hydropathy:0,09772

Domains

Domains [InterPro]
IPR021808
STR
5–428
IPR021808 DC_0576
QQO91238.1
1 482
Architecture
STR
RBD
STR 5-428 | RBD 429-482
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO91238.1
1 482
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,9629
Central domain 160 358 200 0,0999
C-terminal 359 482 123 0,0967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-358
C-terminal
359-482

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps16N
[NCBI] 		2801354 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps16N
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO91238.1 [NCBI]
Genbank nucleotide accession
MW147601 [NCBI]
CDS location
range 33726 -> 35174
strand +
CDS
ATGTCAATCCCAATTTCTGACTTAGTTCAGGTTGATATCGCAATCTCCCCGAACGCCATTGCGACCGATGGTTTTGGGCCGTTGCTCTTCATGAGCAAAGAGTTTGTACCGACCGTTGATGTATATCCGGTTCGCTCGTACACCAGTTTGAAAGAAGTTCTCGCAGACTTCCCTGGTGGTGAGATTGCTAAAGCTGCTACCTCCTGGTATTCGCAGAAGCCAACCCCGAAAACTTTCCTGGTCGGTGCTATCAAATATGATACCCTGACTCCAGCAACTCCTGCTACTGTTACTGCTGCAACTGCTGCTGTACTGGCAACGATTAAGCTGGAAACTGCTGCAACCATGCAGTTGAGTGTTAGCGGTGTTCAGTATGTTACTGACCCTATCGACTTCTCTTCTGCTGCCGACTTCGACGAAGTTGCAACTTTGGTAACTACCGCACTGTCTTCTGTTGGTGCTGGCGTAACTGTTACTCAAGATGCTGGTAAGTTTAAACTGACCACTTCTGCAACTGGTATTAACGCAACTATCAGCAACGTTGGTGGTAAAGTTGGTGAAGTGTTGAAGCTGCAATCTTCTGACAGTGCAGTTATTGTTGCTGGTAAGAACGAGCTATCCATCTCTTCCGACTTGTCTAATATTGCAGATGCTCCATTCAACTTCTTCTATGTAGGCCTTGACCGCCAGTATCGTGGCAAAACCTCTCCAGTAGACAACCAAATGTCTGTGGCGAAGTGGTGTGAAGCATCCAGCAAAGTATTTGGCTGGGGTGATAACGACAAGAACATTCTTATCAACGGTACTGATAACAGCTTCCGTCGTGCTAAGAACCAGAACCTGCGTAACACTCTGTGTGTTTACGATGCTTCTGCGAATGGTGATGAATATCCTGAAATTTCTATTCTGGGTCGTGCATCAACTGTTAACTTCAACGTTGCAAACTCTGTTCTTATTCTGGCATACAAGAAAGGTCCAGGTATCTCCACTGCTGACCTGTCTTCTGGTCAGGTAAGTGCACTGCTTTCTTGTGGTGGTAACGCATTCATTTCTGTTGCTGGCAACGTAATGTTCTACAACGGTCGTATGGCTGACGGCACATGGTTCGACTCCGTACAAGGTGTTGAATGGCTGACTCAGAAAGTTCGACTGAACGTGTTCAACTTGTTCTACACCTCCACTACCAAGATTCCTTGGACGGACACTGGTGTAGCAATGGTTAACCAGCAAGTAACCCTGGCGCTCGAACTCGCTAAGACTAACGGCCTCATTGCCCCTGGCTATGATAACGAAGGTGTCTTCTACCCAGAAGGCTACAAAGTTATTTCTACTCCGTTAGAACTCTTGCAGTCGCAGAAGGGTGAACGTATTTGGGAAGGTACTTCCTTTATTGCTATCGGTTCCGGTGCAATCCAGGGTGCTGTAATCTCTGGCAACTTCATTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
33da69f52a66fd052daaaea3ae4b13c0d619b414186283a969aea7f40270012f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8821
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank