Protein

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Genbank accession
AGH07543.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,53
Protein sequence
MAEKSFGVKDLNIVGATGDPTIESNGDLNLKAGQVAIQTNTTVTGVVTATAFVGNGAGLTNLPGGGSYGNSDVDTHLNTGSASSGEILSWNGSDYDWVADQTGGGSVPANLTADTLDVVGIVTAGSFVTDLITSDGTGRGFCTRYYITANGSSDYRFAGPGQRNTVGNPTLYLMRGFTYMFENSTGGSHPFRIQFTNTSTGVGTYVSGSQTGVQIFTIPHDAPSSYQYQCTAHGGMLGTFVIPS
Physico‐chemical
properties
protein length:244 AA
molecular weight: 25164,24780 Da
isoelectric point:4,55908
aromaticity:0,09426
hydropathy:-0,13115

Domains

Domains [InterPro]
DC_1726
STR
1–242
DC_1726
IPR008972
STR
146–244
IPR008972
IPR008972
STR
160–242
IPR008972
AGH07543.1
1 244
Architecture
STR
STR 1-244
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM6a
[NCBI] 		682650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07543.1 [NCBI]
Genbank nucleotide accession
HQ317391 [NCBI]
CDS location
range 71514 -> 72248
strand -
CDS
ATGGCAGAAAAATCATTTGGTGTAAAGGACCTGAATATAGTTGGAGCAACTGGTGATCCAACTATAGAAAGTAATGGTGACCTAAATTTAAAAGCTGGTCAAGTTGCAATCCAGACTAACACCACAGTCACAGGAGTTGTTACTGCAACAGCGTTTGTAGGTAACGGTGCTGGATTAACTAACCTTCCAGGCGGAGGTAGTTATGGTAACTCTGATGTTGATACACACCTCAATACTGGTAGTGCTTCCTCTGGAGAGATTCTAAGTTGGAACGGAAGTGACTATGATTGGGTTGCTGATCAGACTGGAGGTGGTAGTGTACCAGCAAACCTCACTGCTGATACTCTAGATGTTGTAGGTATTGTAACTGCTGGTAGTTTTGTTACTGATCTTATTACCAGTGATGGAACTGGTAGAGGATTCTGCACTAGATATTACATCACTGCAAATGGTTCTAGTGACTATCGTTTTGCTGGTCCTGGCCAAAGAAATACTGTGGGAAATCCTACTCTCTACTTAATGAGAGGATTTACATACATGTTTGAGAACTCTACTGGTGGTTCACACCCATTCCGTATTCAGTTTACCAATACATCAACAGGTGTTGGAACATATGTCAGTGGATCTCAAACAGGAGTACAGATTTTCACAATCCCACATGACGCACCATCAAGTTATCAATATCAATGTACCGCTCACGGTGGTATGTTAGGCACATTTGTAATCCCTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
84b7c9ff4306e6af388740c9920010c97546820eb2c98b0fed7acee32a86f2f1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7065
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM6a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank