Protein

View in Explore
Genbank accession
AYD87674.1 [GenBank]
Protein name
fibronectin type III domain protein
RBP type
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MTSFDTWIEQDSLLVADIAAGEYDAATGAAMRKALALSTGWIATTNPVLAKDVALATKTLQESPEEFQAWASGTLTGGYNADGSPSNGVAPNGGYYPITLPGDDGARIFIKSPAKIVSGTLKGDTGDKGWAPVIVSVADGSRRVFQVVDWTGGQGTKPAAGYVGPAGVVPNIANAVDFFAAITDQIASITADRVAAQTARAGAEAASSQANATVASWSDTQVIGRAVAGVNAADAAAGTRVMANPAAHDGVVKKMRLYASASGTLKLRVFSKSGATFTQVGVDYPVAVSVGAAEYNIAVPLLAGQYLGFYAPTGTQDYITGVTFDQDDGGYYATVGDSTSFDASITRTIQLQIGFDLQYVAVTKARVDAVETTALAASTVSGTALVKANAVDGQVQALTALETIGRPIAGVSATAPSAGTFVFATPAVHSGVVKKVRGYVTGASTVKLRVFSKAGDTFTQVGDEVSVSMAPGASELPVVMPIAAGQFLGFFTPANGVNYQAGVSSSVDYGGYYAAAGDVTTFDDSTVGRTVQLQFGFDIEYVAVTKARVDAVETTANGASAVAAANVAKVTAIQGALTQLATIGRATTPVTGSGAGNTTYAFNEPLAAGGVVEVFEVFVLGAGVAEFKLRRFSKTGDNFVQLGSDKVLNLVPGLNAIGSDQLSDWPVSAGDYLGFFAPTNRLAYTNNTSESGGWWGGAGDVTSFTDNTVNTTLRLEAAFHVRERAIPETAVLSSRIGAVEATTATLLGSMAVYAKTTGSRASNGLIFDPDAGSFYAWSFAADVGLDVATNQAIDTVTCRLKVVAGGEKVRLMVYSRPTPSSGTDGVPGAIGDTLLGTTTTTLTSLGLTVGAFGTANLPLPSIITPAAGTTLVFEIDALDASNARVESGIDRANPGTLNQRQRGWYRNGPASAWTTLSTGAALAWSLKGNRYTMPDLDARVAALEQGSGAAVDLLLAAYPTIGLTGFGVTIGGAIHKNGVDLSTSSVIALTPAAAGKERLDIIVADKITGTVSVVAGTERNVNYDAIEYIPAVTAQAAHLATVLVGETAAVAVNAAQFRGLIKVGREGEFSAHVARNRRILRKVIGKAGRGAAIKWGGYGDSLTALQNTSLKPGTLAAQYVANGSWRDLTSWYFSDYPSDTKAMIDADRAARGNMGWNWAVKRALDELAGAAVTTYNNYGIGATTSQNSLTADSGTGLPNGLYPDRIAVPLADGLDAVAIAFGMNERGQTYTYANIVNMIGQFQAVGTICVVIGVPRPNGRNSVSAWRYTNDALEAAAMDAGAAFVSTAMISDDRNLGGIGAPAECLGATNEATSGNPGNHPGLYEHKQYERAAVMQLGF
Physico‐chemical
properties
protein length:1339 AA
molecular weight: 137731,62070 Da
isoelectric point:5,11258
aromaticity:0,07991
hydropathy:0,10179

Domains

Domains [InterPro]
DC_0863
STR
100–448
DC_0863 IPR036514
DC_0863
STR
443–627
DC_0863 SSF52266
AYD87674.1
1 1339
Architecture
STR
STR
STR 100-627 | STR 1086-1321 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage Kronos
[NCBI] 		2340873 Uroviricota > Caudoviricetes > Caudoviricetes incertae sedis > Kronosvirus pelion >
Host Caulobacter sp.
[NCBI] 		78 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD87674.1 [NCBI]
Genbank nucleotide accession
MH884648 [NCBI]
CDS location
range 19047 -> 23066
strand +
CDS
GTGACGTCGTTCGATACTTGGATTGAGCAGGACTCGCTGCTGGTCGCGGATATCGCGGCCGGGGAGTATGACGCGGCGACCGGTGCGGCGATGCGAAAAGCCCTTGCGCTGTCCACCGGCTGGATTGCCACCACGAACCCGGTCCTGGCCAAGGACGTGGCGCTGGCCACGAAGACGCTGCAAGAGTCGCCCGAAGAATTCCAGGCCTGGGCGTCCGGCACCCTGACGGGCGGTTACAACGCGGATGGCTCGCCCAGTAACGGCGTAGCGCCGAACGGCGGATATTACCCCATCACCCTGCCGGGTGACGATGGAGCCCGTATCTTCATCAAGTCCCCGGCCAAGATCGTTTCCGGCACCCTTAAGGGTGACACGGGGGACAAGGGTTGGGCGCCCGTTATCGTGTCGGTGGCTGATGGCTCCCGCCGTGTGTTCCAAGTTGTCGATTGGACAGGCGGTCAGGGAACTAAGCCTGCCGCTGGGTATGTTGGACCGGCTGGCGTAGTTCCGAATATCGCCAACGCCGTCGATTTCTTCGCGGCGATCACCGATCAAATCGCCAGCATCACCGCAGATCGTGTTGCCGCACAAACGGCCAGAGCCGGGGCGGAAGCGGCCTCTAGCCAAGCTAATGCCACTGTGGCGTCATGGTCGGACACCCAAGTAATTGGCCGGGCAGTTGCGGGTGTGAACGCGGCAGATGCCGCCGCTGGAACGCGGGTAATGGCAAATCCGGCGGCTCATGACGGCGTAGTTAAGAAAATGCGCCTCTATGCCAGCGCTTCGGGAACGCTGAAGCTGCGGGTTTTTTCCAAGTCCGGGGCCACCTTCACCCAAGTTGGCGTTGACTATCCTGTTGCCGTTTCGGTGGGTGCTGCCGAGTACAATATTGCTGTGCCATTGTTGGCAGGCCAATATCTCGGGTTCTATGCGCCCACGGGTACGCAAGATTACATCACCGGCGTCACGTTCGATCAGGATGACGGCGGGTACTATGCGACCGTTGGCGATTCTACGTCGTTTGATGCTTCGATCACCCGAACGATTCAGCTTCAGATTGGCTTTGATCTTCAGTACGTGGCCGTAACCAAGGCCCGTGTGGATGCGGTAGAGACCACGGCTCTAGCAGCCTCCACCGTGTCGGGCACGGCTCTGGTAAAGGCCAACGCGGTAGACGGGCAGGTGCAGGCGCTGACGGCGCTGGAAACCATCGGGCGGCCTATCGCTGGCGTAAGCGCGACCGCCCCGTCTGCGGGGACCTTTGTTTTCGCCACGCCTGCCGTTCATTCTGGGGTGGTCAAGAAGGTTCGGGGATATGTCACCGGTGCCAGCACTGTAAAGCTGCGCGTCTTTTCCAAAGCGGGAGACACGTTCACCCAAGTTGGCGACGAAGTGTCCGTTTCCATGGCCCCCGGCGCTAGTGAATTGCCGGTGGTTATGCCTATCGCCGCCGGACAGTTCTTGGGGTTCTTCACGCCAGCAAACGGCGTCAACTATCAGGCCGGAGTCAGTTCAAGCGTTGACTATGGCGGATACTACGCCGCTGCTGGAGATGTTACGACTTTCGACGACTCCACTGTAGGACGGACTGTCCAGCTCCAGTTTGGGTTTGATATCGAGTACGTGGCCGTAACCAAGGCCCGCGTGGATGCGGTAGAGACCACGGCCAACGGTGCTTCAGCAGTCGCTGCTGCGAACGTGGCGAAAGTGACGGCTATACAGGGGGCATTGACCCAACTGGCGACGATCGGCCGGGCAACCACTCCGGTAACCGGCAGTGGAGCCGGAAACACCACATACGCTTTTAACGAACCTCTAGCCGCCGGGGGCGTGGTCGAGGTGTTCGAGGTTTTTGTACTTGGCGCGGGGGTGGCTGAGTTCAAGCTTCGGCGTTTCAGCAAGACGGGTGACAACTTCGTCCAGCTTGGAAGTGACAAGGTTCTAAATCTCGTTCCGGGGCTCAATGCCATTGGGAGCGATCAACTGTCCGACTGGCCGGTCAGCGCCGGTGATTATCTGGGATTCTTCGCCCCGACCAACCGCCTTGCCTACACGAACAATACGTCTGAAAGCGGCGGGTGGTGGGGCGGCGCGGGCGACGTCACGTCGTTCACCGACAACACGGTGAACACGACTTTGCGTCTTGAAGCCGCTTTCCATGTTCGGGAGCGCGCTATTCCTGAGACGGCAGTTCTGTCTAGCCGCATTGGAGCGGTCGAGGCTACTACCGCCACGCTGCTGGGCTCGATGGCGGTCTATGCCAAAACGACGGGTTCCCGCGCATCCAACGGTCTGATTTTCGACCCGGACGCAGGTTCTTTCTACGCCTGGAGCTTCGCGGCTGATGTCGGGCTTGATGTCGCCACAAACCAAGCCATCGACACGGTGACGTGCCGCCTGAAGGTGGTGGCGGGCGGCGAGAAAGTGCGCCTGATGGTATATTCCAGGCCGACGCCCAGCAGCGGCACGGACGGGGTACCGGGCGCAATTGGTGATACGCTTTTGGGAACGACGACCACGACGCTTACGAGTCTTGGCCTGACTGTGGGCGCGTTCGGAACGGCAAACTTGCCGTTGCCGTCGATTATCACCCCGGCGGCGGGAACTACTCTGGTATTCGAGATTGACGCCCTCGACGCCAGTAACGCGCGTGTTGAGAGCGGTATTGATCGGGCTAACCCTGGCACGCTCAACCAGCGTCAAAGAGGTTGGTATCGTAATGGCCCAGCTAGTGCGTGGACCACGTTAAGCACGGGCGCAGCCCTAGCGTGGTCCTTGAAGGGCAACCGCTACACTATGCCTGACCTTGACGCCCGTGTTGCGGCGCTGGAGCAGGGCTCCGGTGCTGCTGTGGATTTGCTGCTGGCGGCCTATCCCACTATCGGCTTGACGGGCTTTGGCGTCACGATCGGCGGGGCGATCCATAAGAACGGAGTGGACCTTAGTACAAGTTCGGTGATCGCACTTACGCCCGCAGCTGCGGGCAAGGAGCGCCTTGACATTATCGTGGCCGACAAGATCACGGGTACTGTTTCGGTAGTCGCTGGAACAGAGCGAAACGTGAACTATGACGCTATCGAGTATATCCCGGCGGTGACGGCGCAGGCGGCGCACCTCGCTACGGTTTTGGTGGGGGAAACGGCAGCCGTTGCCGTGAACGCCGCGCAATTCCGAGGTCTGATCAAAGTGGGGCGTGAGGGCGAGTTCTCCGCCCACGTCGCCCGTAACCGTCGAATTCTGCGCAAGGTCATTGGTAAGGCGGGCCGGGGTGCTGCGATTAAGTGGGGTGGTTATGGCGACAGCCTTACCGCGCTGCAAAACACCAGCTTGAAGCCTGGCACTCTGGCCGCTCAGTACGTCGCCAACGGGTCTTGGCGCGATCTTACGTCCTGGTATTTTTCGGACTATCCGAGCGACACTAAGGCCATGATCGACGCCGACCGCGCGGCGCGTGGGAACATGGGGTGGAATTGGGCGGTTAAGCGGGCCCTTGACGAATTGGCCGGGGCGGCGGTCACGACGTATAACAATTACGGTATCGGGGCCACGACTAGCCAGAATTCGCTTACGGCTGACAGCGGCACCGGCCTGCCTAACGGGCTGTATCCAGACCGTATTGCTGTTCCTCTCGCCGATGGTTTGGATGCGGTCGCTATCGCGTTCGGCATGAACGAGCGCGGGCAAACCTACACCTATGCGAACATCGTCAACATGATTGGACAGTTCCAGGCCGTAGGAACGATTTGCGTCGTGATCGGTGTTCCGCGCCCGAATGGTCGAAACTCTGTTTCGGCCTGGAGGTACACGAACGATGCTCTGGAGGCGGCGGCCATGGACGCGGGGGCGGCTTTTGTCTCCACGGCAATGATTTCTGACGATCGCAACCTTGGTGGGATCGGAGCGCCCGCCGAGTGCCTTGGCGCTACCAATGAGGCCACGTCAGGCAACCCCGGAAACCATCCAGGCCTGTACGAGCACAAGCAATATGAAAGGGCTGCTGTTATGCAGCTTGGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6162d08ff952853ce7847558588d8bf14822daf4f5f766acbfae63658595c42
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7660
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and characterization of a novel rhizosphere caulophage that is similar to lambdoid phages Berrios,L. and Ely,B. 2019-02-27 — GenBank