Protein

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Genbank accession
QBX28707.1 [GenBank]
Protein name
hyaluronate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSENIPLRVQFKRMTASEWARSDVILLESEIGFETDTGFARAGDGHNRFSDLGYISPLDYNLLTNKPNIDELATKVETAQKLQQKADKETVYTKAESKQELDKKLNLKGGVMTGQLKFKPAATVAYSSSTGGAVNIDLSSSRGAGVVVYSDNDTSDGPLMSLRTGKETFNQSALFVDYKGTTNAVNIAMRQPTTPNFSSALNITSGNENGSAMQIRGVEKALGTLKITHENPSIKADYDKNAAALSIDIVKKQESGGKGTAAQGIYINSTSGTTGKLLRIRNLNDDKFYVKPDGGFYAKETSQIDGNLKLKDPIANDHAATKAYVDGEVEKLKALLTAKQM
Physico‐chemical
properties
protein length:341 AA
molecular weight: 36852,97660 Da
isoelectric point:8,39851
aromaticity:0,06452
hydropathy:-0,50557

Domains

Domains [InterPro]
SSF69349
STR
7–336
SSF69349
IPR041352
ATT
9–45
IPR041352 Coil IPR009860
QBX28707.1
1 341
Architecture
ATT
STR
ATT 7-45 | STR 46-336 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX28707.1
1 341
Domain Start End Length (AA) Confidence
N-terminal 1 113 113 0,9923
Central domain 114 312 200 0,1394
C-terminal 313 341 28 0,9882
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-113
Central
114-312
C-terminal
313-341

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan460
[NCBI] 		2548184 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pyogenes
[NCBI] 		1314 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX28707.1 [NCBI]
Genbank nucleotide accession
MK448949 [NCBI]
CDS location
range 33739 -> 34764
strand +
CDS
ATGAGTGAAAATATACCGCTGCGAGTCCAATTTAAGCGGATGACTGCTAGCGAGTGGGCTCGTAGTGATGTCATCTTACTGGAGAGTGAGATAGGCTTTGAGACAGACACAGGTTTTGCCAGAGCAGGTGATGGCCACAATCGATTTAGTGATCTTGGATACATTAGCCCACTCGATTACAATCTACTGACTAACAAGCCAAATATCGATGAATTAGCGACAAAAGTCGAGACCGCTCAGAAACTACAACAAAAAGCAGATAAAGAGACCGTCTATACAAAAGCTGAATCGAAGCAAGAGCTTGACAAGAAATTAAATCTCAAAGGTGGCGTTATGACAGGTCAACTAAAATTTAAGCCAGCCGCCACTGTTGCTTATTCCTCGTCAACGGGTGGGGCGGTCAATATTGACTTGTCGTCTAGCAGAGGTGCTGGTGTTGTTGTCTATTCTGACAATGATACTAGTGATGGGCCGTTGATGAGCTTGCGGACGGGTAAAGAGACTTTCAATCAATCGGCGCTTTTTGTCGATTATAAGGGAACAACAAATGCCGTTAATATTGCGATGCGTCAGCCAACCACCCCCAATTTTTCATCGGCGCTTAATATTACTAGCGGCAATGAAAATGGTAGTGCGATGCAAATTAGAGGCGTTGAAAAAGCATTGGGAACGCTCAAAATCACACACGAAAACCCAAGTATTAAAGCGGATTATGATAAAAATGCGGCAGCGTTATCTATTGATATCGTTAAAAAACAGGAAAGTGGTGGAAAAGGTACTGCTGCTCAAGGAATCTACATTAACTCAACATCAGGTACGACAGGGAAGTTGCTTAGGATTAGAAACCTTAATGATGATAAGTTCTACGTCAAGCCTGACGGTGGTTTTTATGCCAAGGAAACTTCGCAGATTGATGGCAACCTGAAGCTCAAGGATCCCATAGCGAATGATCATGCGGCAACCAAAGCTTATGTTGATGGTGAAGTCGAAAAATTAAAAGCACTCTTAACGGCCAAGCAAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21f50bf22e81e49657de573a23fcebc0e89489b9d6e2ce052336d4d3458cac7e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7600
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank