Protein

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Genbank accession
AUR96538.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRRFLDQIRAEINTYLVTGGGTTANELSPTLIDMLDSTIEDEAAIFSLVQTDNVPTTTGWTKINTTVYGGSQGGDGVFLKPDFANGQIVTNTVAGFSYNVGAAISFEGQANTRFDFRLLKDGIPVGIIDIQTGEGNNDPITANPRVYIPSADSDAVFSVGVRSPDGANNIDIISAVLYATILPTNNP
Physico‐chemical
properties
protein length:188 AA
molecular weight: 19937,90520 Da
isoelectric point:4,13637
aromaticity:0,07979
hydropathy:-0,03777

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.226.O._10N.261.48.E5
[NCBI] 		1881227 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96538.1 [NCBI]
Genbank nucleotide accession
MG592593.1 [NCBI]
CDS location
range 8024 -> 8590
strand +
CDS
ATGACACGCAGATTTTTAGATCAAATTAGAGCAGAGATAAATACCTACCTTGTTACTGGAGGCGGTACTACTGCAAACGAACTAAGCCCGACTTTAATAGATATGCTCGACTCAACCATAGAGGATGAGGCGGCAATTTTTTCACTTGTGCAGACCGATAACGTACCAACAACCACTGGATGGACGAAGATTAACACAACTGTTTACGGTGGTTCTCAGGGCGGTGACGGTGTGTTTTTAAAGCCTGATTTTGCCAATGGCCAGATAGTGACAAATACGGTTGCTGGATTTAGCTACAACGTTGGAGCAGCTATATCATTTGAAGGTCAAGCAAATACTAGGTTTGATTTTAGGCTGCTAAAGGATGGCATTCCTGTTGGAATTATTGACATTCAAACTGGTGAGGGCAACAACGACCCGATAACAGCAAACCCAAGGGTATATATTCCATCCGCTGATAGTGATGCTGTTTTTTCAGTTGGGGTAAGAAGTCCGGACGGAGCAAATAACATAGACATCATAAGCGCAGTCTTATACGCGACAATACTGCCAACAAATAACCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4c9b986204824bab055fe8035039c54bdd7086647480efb3e049d1aaac7523b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7543
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank