Protein

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Genbank accession
WBF04938.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MGAGGFRKNTGRNNTTLPYNVGFLNNVQDTETYNVAVYDELQKVSTATNQMFQAIDEIHDEIDVRIKALHAMNLQFDELENRITTEIETAIADIQTQMGNLSTEDIWDNSVQPPVKLESTVSGFKTSIEGNTTKIQTVEGIVNDQGQEIALVQTEIQNINGSLSQYMKLSEYEATWGVNSTVNGRYAGVKLTNNGTNSQFQVTANKFIVGDGSSGNTPFVFEGGRARMEFADIKNVNITTAQIANARIQWAQIDNVSISNAQIQNLSADKITAGSMWGSNWRLTVGGDFVMGGTGGAQLWMNGNRIDFYDGSGALRIRIGSW
Physico‐chemical
properties
protein length:322 AA
molecular weight: 35288,72430 Da
isoelectric point:4,67179
aromaticity:0,08075
hydropathy:-0,36925

Domains

Domains [InterPro]
DC_0177
ATT
1–159
DC_0177 IPR015406 IPR015406
DC_2243
RBD
289–322
DC_2243
WBF04938.1
1 322
Architecture
ATT
RBD
ATT 1-159 | RBD 160-322
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_YF01
[NCBI] 		3017283 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus YF01
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF04938.1 [NCBI]
Genbank nucleotide accession
OQ025076.1 [NCBI]
CDS location
range 20366 -> 21334
strand +
CDS
ATGGGTGCAGGTGGTTTTCGTAAGAACACTGGTCGCAATAACACCACACTCCCGTACAACGTTGGGTTTCTCAATAATGTACAGGACACAGAAACATATAACGTAGCCGTATATGATGAGCTACAAAAAGTCAGTACAGCTACTAACCAAATGTTCCAAGCTATTGACGAGATTCACGATGAGATTGATGTTCGTATCAAAGCTCTTCATGCGATGAACTTACAATTCGATGAGCTTGAGAATAGAATTACTACAGAGATAGAGACAGCTATTGCCGATATCCAAACACAGATGGGGAACCTCTCCACTGAAGATATTTGGGATAATTCTGTTCAACCCCCTGTAAAATTAGAAAGCACTGTATCTGGCTTTAAAACAAGTATTGAGGGTAACACAACTAAGATTCAAACGGTAGAAGGTATTGTCAACGACCAAGGTCAAGAGATTGCTTTAGTTCAGACAGAGATTCAAAATATTAACGGAAGCCTCTCTCAGTATATGAAGCTTTCTGAGTATGAAGCTACATGGGGAGTTAACTCTACAGTCAACGGAAGATATGCTGGGGTCAAGCTAACCAACAACGGAACAAACAGTCAATTCCAAGTAACAGCTAACAAGTTTATTGTTGGTGATGGTAGCTCTGGTAACACTCCTTTTGTGTTTGAGGGTGGAAGAGCTAGGATGGAGTTTGCTGATATAAAGAACGTCAATATCACAACAGCTCAGATTGCCAACGCTAGAATCCAATGGGCACAGATTGATAACGTATCTATCTCCAATGCTCAGATTCAGAACTTATCAGCGGATAAAATTACTGCTGGTTCTATGTGGGGTTCTAACTGGAGACTTACCGTTGGGGGTGACTTTGTTATGGGTGGTACAGGTGGAGCACAATTGTGGATGAATGGAAACAGGATAGACTTCTATGATGGAAGTGGTGCTCTAAGAATTAGAATAGGGAGTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d56da24a65bc07c30b1bee46d8d93886aea1e7396a9ca2a8ef93f91574fa74a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6665
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Expansion of Kuravirus-like Phage Sequences within the Past Decade, including Escherichia Phage YF01 from Japan, Prompt the Creation of Three New Genera Batinovic,S., Fujii,Y. and Nittami,T. 2023 — GenBank