Protein

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Genbank accession
ABO40676.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
YAASEGSPIILFKSSTRKAGSAVLALSASFGSNSLLSGQTSISRLTVVTEFKAAHTFDSISFFLASSFCCNAQISSNLFVISCSASNMHLSLVGVGSNISSPLPSFPYESHPTLLPDTVR
Physico‐chemical
properties
protein length:120 AA
molecular weight: 12541,07000 Da
isoelectric point:7,95438
aromaticity:0,09167
hydropathy:0,39000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABO40676.1
1 120
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0012
Central domain 11 109 100 0,0150
C-terminal 110 120 10 0,9620
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-109
C-terminal
110-120

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage HK244
[NCBI] 		432199 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABO40676.1 [NCBI]
Genbank nucleotide accession
EF120457 [NCBI]
CDS location
range 1 -> 365
strand +
CDS
ACTATGCGGCTTCGGAAGGAAGTCCAATCATCTTATTCAAATCTTCTACCCGTAAAGCAGGAAGTGCTGTACTTGCTTTATCTGCTTCTTTTGGTAGCAATTCTTTGCTTTCAGGCCAAACTTCAATAAGTCGCTTAACTGTTGTGACTGAGTTCAAAGCAGCCCATACATTTGATTCGATATCCTTTTTCTTGGCTTCAAGTTTTTGTTGCAATGCGCAGATTTCATCAAACCTTTTTGTTATTTCGTGTTCTGCGTCAAACATGCATTTATCTTTGGTCGGAGTAGGGAGCAATATATCTTCGCCGTTGCCGTCTTTCCCATATGAAAGCCATCCAACCCTTCTGCCAGATACAGTCAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f29f36e92407280ebe683f869ac31f5f159088fa1d2c9980cd79aadedec54fc8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3222
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Conservation and diversity in the immunity regions of wild phages with the immunity specificity of phage lambda Degnan,P.H., Michalowski,C.B., Babic,A.C., Cordes,M.H. and Little,J.W. 2007 17376085 GenBank