Protein

View in Explore
Genbank accession
UKM62845.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLKSSSTAGGGLVWTQTNLPFSPQDVKLFYNGNEVIDSVSNQSIGGDKTFTGTLTYKTPVNSNEVAIKGYVDNLDSTSVKSVTGTLPIVVTTGVSPRVSINNATQSAHGAMSKEDKTKLDGLPVRAVNRDGDTMTGNLMVNGQVEANRIKSNGQVEVYDSATNTYAQRLVASGSLLYFQGGKVDRDVTDQRIAFSGWYGTPLTQVRFNMAAGVNPQVSYGNTNYDIFHKGNLPSAEEVKAMAVYDRPPEDDCDKAIMPGNYGVFANTKNTPLGTGPSGSTLLVTKWGNGANAQIFFSYTENRVWVRRQYVSVWQPWAEMYTSLNKQPVGGMGLGVGDSPNAITVTGGVRDFNLIKTTGVFTVDGNWSNGVDNTPTATSHNGVVEVKQRFYDNFTIQKFSNWVTVGGFVEPREFTRVWINAVEGWQPWIPTGLWEQVNTYRTGILRHNNSTNDDSVYPYVSYTKEKYRDGVAVGIPYTIGEIGFRAGSTNRYDPHTGDQLSRIIGQATNTSTSGEYEGTLFLASRYRRGSDGSTADTSTLRISRDVGAEFTHAGKKVQIENGNVNAEKFIATTSGYALQYSGNVSQGIYLDNRTIIGGGSSGVVIRPNGSGTPTGETVFNTTGTISNNQAPTVSNHLTNKAYVDGVALGGFSSIITLRDTDNLNDIKTAGIYSQVANAKALTSLNYPVEKAGNLIVTTSAGVIQKYWVYNSSEVWSRAQYNTGAWKPWYRDYNEEFKPTSADVGALSLTGGTVTGDVRFNSGNTTRLTLGSGSDYYVERSPSGLTLASGTVNPKVKVNNTDYDIYHTGNKPSAADVGTLTTAQINTELNKKLNLSGGIMTGAIRWDATDEYINAASNNIYLAAKTGTVYLESKNNPMVRIGSNDYTIYHTGNKPAAGDFNAYTKTETDNLLNTKLNLSGGTLTGAVTTATIKNAVMINNGASISFQDGSNARFHILAEGNTFKLKHGNSGENQIIQVSTTVTELQNQLSARTAMFVSGADGTRVFGLGAQESSGINPYIYVRRSGDTANIRVMTFNDGEIIANQDRIAAPSFRVINNAGLIFTPFENKQGLSWGMGMDLSNGNLGIHRYQDGVWNLQPFMIGSNGVVTMSTGFNTASGTMSGSLSVNGNIEVGGSVGINSGYASIISNSNNRLEFHRPGFWATMIYMNTDGQLRFTSSNGAGGETKLRMSIDNNGNTGIAGSVNANGGVHDVGQRVYSPSNPIPDGVILRSVVNGGGNMDIGSYAMVTVKSNLGPQGPGTVLQGTQIAFSNAEGTNMVACNYGTWRLMGVSRANSQNGDGWGSWNVTLAQRIT
Physico‐chemical
properties
protein length:1314 AA
molecular weight: 140842,39120 Da
isoelectric point:6,94671
aromaticity:0,08904
hydropathy:-0,35845

Domains

Domains [InterPro]
DC_0505
ATT
1–471
DC_0505 DC_1909 DC_1924
cd19958
STR
260–322
cd19958 cd19958 DC_1142
UKM62845.1
1 1314
Architecture
ATT
STR
RBD
ATT 1-471 | STR 592-948 | RBD 1076-1314
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKM62845.1
1 1314
Domain Start End Length (AA) Confidence
N-terminal 1 576 576 0,2477
Central domain 577 775 200 0,2426
C-terminal 776 1314 538 0,7324
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-576
Central
577-775
C-terminal
776-1314

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage P19
[NCBI] 		2914179 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas dhakensis
[NCBI] 		196024 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKM62845.1 [NCBI]
Genbank nucleotide accession
OM339718.1 [NCBI]
CDS location
range 177387 -> 181331
strand +
CDS
ATGGCAGACCTTAAGAGTTCGTCTACCGCTGGGGGTGGATTAGTTTGGACACAGACTAACCTACCATTTTCCCCGCAAGACGTTAAGCTGTTTTATAATGGTAATGAGGTTATTGATAGTGTTAGTAATCAATCTATTGGTGGGGATAAAACCTTTACCGGAACATTGACATATAAAACTCCTGTCAATTCTAATGAAGTTGCCATTAAAGGTTATGTTGATAACCTAGATAGTACATCGGTGAAATCTGTAACCGGGACTCTCCCAATCGTCGTTACTACTGGTGTAAGTCCGCGAGTTTCAATTAATAACGCAACGCAATCCGCCCATGGGGCAATGAGTAAAGAAGACAAAACAAAACTTGACGGTTTGCCTGTTCGAGCTGTTAATAGAGATGGTGATACCATGACTGGAAACCTAATGGTTAATGGTCAGGTTGAAGCAAATAGAATTAAGTCCAACGGTCAAGTTGAAGTTTATGATTCTGCTACCAATACATATGCACAACGTCTAGTTGCATCTGGTTCCTTACTTTATTTCCAAGGTGGTAAAGTAGATAGAGACGTTACGGATCAACGAATTGCTTTTAGTGGTTGGTATGGTACACCACTAACTCAAGTAAGATTTAATATGGCTGCCGGGGTTAATCCTCAAGTGTCTTATGGAAATACAAACTATGATATTTTCCATAAAGGTAATTTGCCTAGTGCGGAAGAAGTAAAGGCAATGGCGGTATATGATCGTCCACCAGAAGATGATTGCGATAAAGCAATTATGCCCGGTAACTATGGTGTTTTCGCCAATACTAAAAATACTCCATTAGGAACTGGTCCTAGTGGTTCAACCCTTCTCGTTACCAAGTGGGGTAATGGTGCAAACGCTCAGATATTCTTTTCTTATACTGAAAACCGTGTATGGGTGCGCAGACAATATGTCAGTGTGTGGCAGCCATGGGCGGAAATGTATACATCACTCAATAAGCAACCTGTCGGTGGTATGGGTCTTGGTGTCGGCGATAGCCCTAACGCGATTACTGTAACTGGTGGGGTTCGTGACTTTAATCTAATCAAGACGACTGGGGTGTTTACAGTCGATGGTAACTGGTCTAATGGTGTTGATAACACTCCAACTGCAACAAGCCATAATGGTGTTGTTGAGGTAAAACAAAGGTTTTATGATAACTTCACGATTCAGAAATTCAGTAACTGGGTAACAGTCGGTGGATTCGTAGAACCAAGAGAGTTTACAAGGGTATGGATCAACGCAGTTGAAGGTTGGCAACCATGGATACCAACTGGTTTGTGGGAACAGGTAAACACATACAGAACTGGTATTCTGAGACACAACAACTCTACTAATGACGATAGTGTTTATCCTTACGTATCTTATACCAAGGAAAAATATCGCGATGGAGTTGCTGTTGGTATTCCATATACCATTGGTGAAATTGGTTTTAGAGCTGGTTCTACAAATAGATATGATCCTCATACTGGCGACCAATTATCTAGAATTATAGGTCAAGCCACCAACACATCCACATCAGGTGAATATGAAGGCACTTTGTTCTTAGCTTCTAGATATCGCAGAGGGTCTGATGGTTCGACTGCTGATACTAGTACACTAAGAATAAGTAGAGATGTTGGTGCTGAATTCACCCATGCTGGTAAGAAAGTACAAATCGAAAATGGTAATGTAAATGCAGAGAAGTTTATTGCAACTACATCTGGTTATGCACTTCAATATTCCGGTAATGTAAGCCAAGGAATCTACTTAGATAATAGAACAATTATTGGGGGTGGTTCATCTGGTGTTGTGATTCGTCCGAATGGTTCTGGTACTCCAACTGGTGAAACTGTATTTAATACAACTGGTACTATATCAAATAACCAAGCACCAACTGTATCAAACCATTTAACAAACAAGGCTTATGTTGATGGTGTTGCTCTTGGTGGTTTTAGTTCTATTATCACACTGAGAGATACAGATAACCTCAACGATATTAAAACCGCTGGTATATATAGCCAAGTTGCTAACGCTAAAGCATTAACTAGTTTGAACTATCCAGTTGAAAAAGCCGGAAACTTGATTGTTACTACTTCTGCTGGTGTAATTCAAAAATATTGGGTATATAACTCATCCGAGGTTTGGTCTCGTGCTCAATATAATACGGGTGCATGGAAACCATGGTATCGTGATTATAACGAAGAGTTTAAACCTACATCCGCTGATGTTGGGGCGCTGTCTCTGACTGGTGGTACTGTAACCGGAGACGTTAGATTTAACTCTGGTAACACCACTAGATTGACTCTTGGTAGTGGTTCTGATTATTACGTCGAACGCTCACCATCTGGATTGACATTAGCTTCTGGAACTGTCAATCCGAAGGTTAAAGTTAATAACACAGATTATGACATATATCATACCGGCAATAAACCATCAGCCGCCGACGTTGGTACATTAACAACTGCACAGATAAACACAGAGCTTAACAAAAAGCTTAATCTGTCTGGTGGTATCATGACTGGTGCAATTCGTTGGGATGCAACAGATGAATATATCAACGCCGCGAGCAACAATATATATCTGGCTGCTAAGACTGGTACTGTATATCTTGAAAGCAAAAATAACCCAATGGTGAGGATTGGAAGTAACGATTACACCATATATCACACTGGTAATAAACCTGCTGCTGGTGATTTTAATGCATACACAAAAACTGAAACAGATAATTTACTTAATACTAAATTAAATCTGTCTGGTGGTACTCTAACTGGAGCGGTAACTACTGCAACCATAAAGAATGCTGTTATGATTAATAATGGTGCATCGATTAGTTTTCAAGATGGTTCTAATGCTAGATTTCATATATTAGCAGAAGGAAACACATTTAAACTAAAACATGGTAACTCAGGTGAAAACCAGATAATACAAGTTAGCACAACAGTAACAGAATTACAAAACCAATTGAGTGCAAGAACTGCAATGTTTGTAAGTGGTGCAGATGGTACTAGGGTATTTGGGCTTGGAGCACAAGAATCTTCTGGTATAAACCCATACATATATGTAAGAAGATCTGGAGACACTGCAAACATACGTGTAATGACGTTTAATGATGGCGAGATTATTGCTAACCAAGACAGAATTGCCGCACCATCTTTCCGGGTTATCAATAATGCTGGTCTGATATTCACCCCGTTCGAAAACAAACAAGGTTTGTCTTGGGGGATGGGTATGGATCTATCTAATGGTAACCTTGGTATCCATCGTTATCAAGATGGTGTATGGAATCTCCAACCATTTATGATAGGTTCGAACGGTGTGGTTACTATGAGTACGGGTTTCAACACAGCCAGCGGAACAATGTCTGGTTCCCTAAGTGTTAATGGAAACATTGAGGTTGGTGGATCTGTAGGTATTAATAGTGGTTATGCCTCTATCATTAGCAATAGTAATAACAGACTGGAATTTCATCGTCCCGGATTTTGGGCAACAATGATTTACATGAACACAGACGGTCAACTTCGATTTACATCAAGTAATGGTGCCGGTGGTGAAACTAAACTCAGAATGTCTATTGATAACAATGGTAATACCGGAATAGCAGGTTCTGTTAACGCTAATGGTGGTGTTCACGACGTAGGTCAACGAGTTTATTCACCAAGTAACCCAATTCCAGATGGTGTAATACTGAGATCAGTCGTCAATGGCGGCGGCAATATGGATATTGGTTCATATGCGATGGTCACAGTCAAATCCAACCTTGGTCCACAAGGTCCGGGGACTGTTCTCCAAGGTACTCAGATTGCATTCTCGAACGCGGAAGGTACTAATATGGTTGCTTGTAACTATGGTACATGGCGTCTGATGGGTGTTTCAAGAGCAAATTCCCAAAACGGCGACGGTTGGGGTTCTTGGAACGTAACATTGGCACAGAGGATAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0015d7089ccbb9a6d741539e689a675e47a0c0f3f6a732e399585f085b7c8f52
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of bacteriophages against Aeromonas spp Nagar,V., Pansare Godambe,L., Newase,S., Tyagi,A. and Shashidhar,R. 2024-10-17 — GenBank