Protein

View in Explore
Genbank accession
XLL21339.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MNKFINCTAIDCGVGFSFGEGVQASLNGCYAEGNNIGYQFHENSDVEMTSSTAKKNKIGTEVIGGSRSQSNSRANVNNRAYAQTPVRHGGCSYEILYAIAYLTQIVGYNPFE
Physico‐chemical
properties
protein length:112 AA
molecular weight: 12118,26630 Da
isoelectric point:6,07759
aromaticity:0,10714
hydropathy:-0,35625

Domains

Domains [InterPro]
IPR011050
STR
4–88
IPR011050
XLL21339.1
1 112
Architecture
STR
STR 4-88 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL21339.1
1 112
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0041
Central domain 11 101 92 0,9434
C-terminal 102 112 10 0,3366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-101
C-terminal
102-112

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 10N.286.55.E6_PE001
[NCBI] 		3385356 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL21339.1 [NCBI]
Genbank nucleotide accession
PQ189376 [NCBI]
CDS location
range 12146 -> 12484
strand +
CDS
ATGAATAAGTTTATTAACTGTACAGCTATTGATTGTGGAGTTGGATTTTCATTTGGCGAAGGTGTTCAAGCTAGCTTAAATGGTTGTTATGCAGAAGGTAATAATATTGGTTACCAGTTTCATGAGAATAGTGATGTTGAAATGACATCATCAACTGCAAAAAAAAACAAGATTGGCACAGAGGTTATAGGTGGAAGTAGGAGCCAATCGAACAGTAGAGCTAATGTCAACAACAGAGCTTATGCTCAAACACCCGTTAGGCACGGAGGTTGTTCATATGAAATCCTATATGCAATAGCATATCTAACACAAATCGTTGGATACAATCCATTTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c738370b4dc99bae00e1308ee4759c1ccc43562eecd44fea09578c69271fd6c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50