Protein

View in Explore
Genbank accession
YP_010671115.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MENVKYLENGSIQADIDGQTVIIPDDMGNRYRQMVLEWESQGNEISPYIPPRPTSDQINAERERRISKGISIEVTGVGSIPITGTTQDTRNLQSLFSVATSRISTGDTTTITPFRDANNATQNLTPGQIVELFLKSTAYLSYLYDKSWTIKAMDPIPYNFADDEYWTD
Physico‐chemical
properties
protein length:168 AA
molecular weight: 18908,76280 Da
isoelectric point:4,47069
aromaticity:0,08929
hydropathy:-0,53929

Domains

Domains [InterPro]
DC_1488
ATT
1–54
DC_1488 IPR025484
YP_010671115.1
1 168
Architecture
ATT
STR
ATT 1-54 | STR 55-152 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM30
[NCBI] 		2509764 Uroviricota > Caudoviricetes > Kleczkowskaviridae > Cuauhnahuacvirus TM30 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010671115.1 [NCBI]
Genbank nucleotide accession
NC_070966.1 [NCBI]
CDS location
range 175526 -> 176032
strand -
CDS
ATGGAAAATGTAAAATACTTAGAAAATGGGTCGATCCAAGCGGATATTGACGGTCAGACTGTAATTATTCCAGACGATATGGGAAATCGTTATCGTCAAATGGTTCTTGAGTGGGAGAGTCAAGGTAATGAGATTTCTCCTTACATTCCACCTAGACCTACCTCAGATCAAATTAATGCAGAACGTGAGAGACGTATTTCTAAAGGAATCTCGATTGAAGTAACTGGAGTAGGATCTATACCTATTACAGGTACAACACAAGATACCAGAAATCTTCAATCACTATTCTCAGTAGCTACAAGTAGGATCTCTACAGGTGACACAACAACAATTACACCTTTTAGAGACGCCAATAATGCAACCCAGAATCTTACTCCTGGTCAAATCGTTGAATTATTCTTAAAGTCCACTGCATATTTATCGTATCTTTACGACAAATCCTGGACGATTAAAGCAATGGATCCTATTCCTTATAATTTTGCAGACGATGAATACTGGACTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d37b93b363bce9f8a6e347ea43217ceb5b7cdf8d26e766cc8cabac892eae89de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9038
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank