Protein

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Genbank accession
QBX26065.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDITIQQTRSKALEKDGRYYKVFTPRSPDEVVKLHHMGCVGDTVARNIQIEKGTSPSSFASPVTTSRALTGLFKDMRDINIELTDQNSPLWGRIRANNRGMLSEFLDRDVRSALAQTSSSILAQVEAKDQGNIKRSELILDNNGFVTKVGKTINGTTLATMIAQNERDVSIIAQKFKVTGDMLVDGAITARKLDTNSVRTGILTAGSITADMIQSGAITGDKLKVDTALINKLATNSALIDNLVAKDAFITKLQSVDLDASRIKSGVLKSKNGSVTWNLDANRLDFYTGAGIEFHDWDNYIKFHSGGSVAFIQPTVRQGTNRAALAIGVNGNNSIDSNTGAFAGIKIFKDNLWDNVSIYGDTIQLTSGFNENHALFIDVVKFNGGFNLGDILQTFNENFKSLSNGKPGDVLTWNKIYG
Physico‐chemical
properties
protein length:418 AA
molecular weight: 45510,86490 Da
isoelectric point:8,71524
aromaticity:0,07177
hydropathy:-0,23325

Domains

Domains [InterPro]
DC_0720
STR
3–411
DC_0720
IPR012892
RBD
12–128
IPR012892 IPR012892
QBX26065.1
1 418
Architecture
STR
STR 3-411 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan290
[NCBI] 		2548096 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus marmotae
[NCBI] 		1825069 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26065.1 [NCBI]
Genbank nucleotide accession
MK448900.1 [NCBI]
CDS location
range 29338 -> 30594
strand +
CDS
ATGGATATTACAATTCAACAGACCCGCTCGAAGGCGCTTGAAAAGGACGGGCGGTATTATAAGGTGTTTACCCCTCGCAGTCCTGATGAGGTGGTGAAATTGCACCATATGGGCTGTGTGGGGGATACAGTTGCGCGCAATATTCAGATTGAAAAGGGGACAAGTCCGTCTAGCTTTGCCTCTCCTGTGACCACAAGTCGTGCGTTGACGGGTTTGTTTAAGGATATGCGGGATATCAATATCGAGTTGACAGACCAAAATAGCCCGCTCTGGGGGAGAATTCGTGCTAATAACAGGGGGATGTTAAGCGAGTTTCTGGATAGGGATGTGAGGAGCGCCCTAGCGCAGACCAGTAGCTCTATTCTCGCTCAAGTCGAGGCAAAAGACCAAGGCAATATCAAGCGTTCGGAGTTGATACTGGATAACAATGGCTTTGTGACGAAGGTCGGTAAAACCATCAACGGGACGACTCTAGCGACCATGATTGCCCAGAATGAGCGAGATGTGTCGATTATTGCGCAGAAGTTCAAGGTGACAGGTGACATGTTGGTCGATGGTGCCATTACGGCAAGAAAGCTTGATACCAATAGCGTCCGAACAGGGATTCTGACGGCGGGGTCGATTACGGCAGATATGATTCAGTCGGGCGCTATCACGGGTGACAAGCTAAAGGTCGATACGGCTTTGATTAATAAACTCGCCACCAACAGTGCCTTGATTGATAACTTGGTCGCAAAGGATGCGTTTATCACTAAGCTTCAGTCGGTGGATTTGGATGCGTCGAGAATCAAGAGTGGGGTGTTGAAATCTAAAAACGGCAGCGTCACTTGGAATTTAGATGCGAATAGGCTTGATTTTTATACTGGAGCTGGTATCGAATTTCATGATTGGGATAATTATATCAAGTTTCATTCTGGTGGTTCAGTTGCTTTTATACAGCCAACGGTTCGTCAAGGAACAAATCGTGCCGCCTTGGCGATAGGAGTTAATGGCAATAACTCAATTGATTCAAACACGGGTGCCTTTGCAGGTATAAAAATCTTCAAGGATAATCTTTGGGATAATGTGTCTATTTACGGAGATACGATCCAGTTAACGAGTGGATTTAATGAAAATCACGCTCTTTTTATTGATGTAGTGAAATTTAATGGAGGCTTCAATTTAGGGGATATACTCCAAACGTTCAATGAAAACTTTAAGAGTTTGAGCAACGGAAAACCAGGTGATGTTTTGACTTGGAATAAAATTTATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c3fac76e657e891cd1b5e5fc326dc2d6ce98516cb07c0abf7f11405e5bfeca9c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7722
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank