Protein

View in Explore
Genbank accession
AYP28213.1 [GenBank]
Protein name
Depo32 (depolymerase)
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKEFDFESLQNLANQIKADSEASESSAAAAAASESKAKTSEDNAKSSENAAKNSEVAAETTRDQIQQIIDNAGDQSTLVVLAQPDGFDSIGRVSSFAALRNLKPKKSGQHVLLTSYYDGWAAENKMPTGGGEFISSIGTATDDGGYIAAGPGYYWTRVVNNNSFTAEDFGCKTTATPPPNFNVLPAELFDNTARMQAAFNLAISKSFKLNLSAGTYYFESSDTLRITGPIHIEGRPGTVFYHNPSNKANPKTDAFMNISGCSMGRISSINCFSNSYLGKGINFDRSVGDNRKLVLEHVYVDTFRWGFYVGEPECINQIEFHSCRAQSNYFQGIFIESFKEGQEYGHSAPVHFFNTICNGNGPTSFALGATYKTTKNEYIKVMDSVNDVGCQAYFQGLSNVQYIGGQLSGHGSPRNTSLATITQCNSFIIYGTDLEDINGFTTDGTAITADNIDTIESNYLKDISGAAIVVSSCLGFKIDSPHIFKIKTLSTIKLMNNTYNYEIGGFTPDEALKYNVWDANGLATNRISGVIHPRLVNSRLGINSVAFDNMSNKLDVSSLIHNETSQIIGLTPSTGSNVPHTRIMWSNGAMYSSTDLNNGFRLNYLSNHNEPLTPMHLYNEFSVSEFGGSVTESNALDEIKYIFIQTTYANSGDGRFIIQALDASGSVLSSNWYSPQSFNSTFPISGFVRFDVPTGAKKIRYGFVNSANYTGSLRSHFMSGFAYNKRFFLKIYAVYNDLGRYGQFEPPYSVAIDRFRVGDNTTQMPSIPASSATDVAGVNEVINSLLASLKANGFMSS
Physico‐chemical
properties
protein length:907 AA
molecular weight: 98562,60100 Da
isoelectric point:5,29298
aromaticity:0,10805
hydropathy:-0,21731

Domains

Domains [InterPro]
DC_0854
ATT
2–404
DC_0854 DC_0430 G3DSA:6.10.140.1630
IPR011050
STR
300–480
IPR011050
AYP28213.1
1 907
Architecture
ATT
STR
STR
RBD
ATT 2-404 | STR 405-480 | STR 482-870 | RBD 871-907
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYP28213.1
1 907
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,9905
Central domain 281 667 388 0,9898
C-terminal 668 907 239 0,9763
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-280
Central
281-667
C-terminal
668-907

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage GH-K3
[NCBI] 		2419608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP28213.1 [NCBI]
Genbank nucleotide accession
MH844531 [NCBI]
CDS location
range 18124 -> 20847
strand +
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACTAAATGGCAATCATCGCTTTCGCTGATTCGCCCTGGTGCGACGATTATGTTTTTATCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTAGTCAGTGACACGGAAATTAAAGCAATTACCACAAACGGCGCTGTCGTAGCGTCTACTGACTACGCGATCCTGTTAAGCGACTCGCTTACCGTTGACGGACTGGCGCAAGATGTTGCTGAAACTCTTCGCTACTATCAGTCACAGGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGGAGTTCGATTTCGAATCGCTGCAAAATCTTGCTAACCAAATTAAGGCAGACTCCGAAGCTTCGGAATCAAGCGCTGCGGCTGCGGCTGCGTCTGAAAGTAAGGCAAAAACTTCAGAGGATAACGCAAAATCTTCTGAAAATGCGGCAAAAAATTCAGAGGTTGCAGCGGAGACTACAAGAGACCAAATTCAGCAGATCATTGACAACGCTGGAGATCAATCAACGCTGGTTGTTTTGGCGCAACCTGACGGATTTGACTCCATCGGTCGCGTCAGTTCATTTGCTGCTCTACGTAACTTGAAACCTAAAAAGTCTGGTCAGCATGTTCTGCTTACATCGTATTATGATGGTTGGGCGGCGGAAAATAAAATGCCAACAGGCGGTGGTGAGTTTATCAGTAGCATAGGAACGGCCACTGACGATGGTGGGTATATCGCTGCTGGCCCTGGGTACTATTGGACACGAGTGGTAAATAATAATTCATTTACAGCCGAGGATTTTGGTTGTAAAACTACTGCAACACCACCACCAAACTTTAACGTTTTACCTGCTGAACTTTTTGATAACACAGCAAGGATGCAAGCTGCTTTCAATCTTGCAATTAGTAAATCTTTCAAATTAAATCTTAGCGCAGGAACATACTATTTTGAAAGTTCAGATACATTAAGAATAACAGGGCCAATCCATATCGAAGGCCGTCCAGGGACTGTTTTTTATCACAACCCATCAAACAAGGCTAACCCAAAAACTGACGCCTTCATGAACATAAGCGGATGTTCTATGGGGAGAATATCAAGCATAAATTGCTTTTCTAACTCATATTTAGGGAAGGGGATAAACTTTGATAGAAGCGTAGGAGACAATAGGAAATTAGTATTGGAGCACGTCTATGTAGACACGTTCAGATGGGGTTTCTATGTTGGCGAACCTGAATGTATCAATCAGATTGAATTTCATAGTTGCAGGGCGCAATCAAACTATTTTCAAGGTATATTCATTGAGTCTTTTAAAGAAGGGCAGGAATATGGACATAGCGCACCAGTACATTTTTTCAACACAATTTGCAACGGGAATGGGCCAACCAGTTTTGCTCTTGGTGCGACATATAAGACAACGAAAAATGAATATATCAAAGTAATGGATAGTGTTAATGATGTTGGTTGCCAGGCTTATTTCCAAGGATTAAGCAACGTTCAGTACATTGGTGGTCAGTTATCAGGACATGGGAGCCCACGCAATACATCACTAGCAACTATAACACAATGTAATTCATTCATAATTTACGGCACTGATCTGGAGGACATTAATGGCTTCACAACTGACGGAACAGCAATAACGGCTGATAATATTGATACTATTGAGTCAAATTACTTAAAGGATATTTCTGGCGCTGCAATAGTTGTGTCGTCATGCCTTGGTTTTAAAATAGATAGCCCGCACATATTCAAGATCAAGACGCTATCTACAATAAAACTCATGAATAACACATATAATTATGAGATTGGTGGGTTCACTCCAGACGAGGCATTAAAATATAACGTATGGGATGCTAATGGATTGGCAACAAACAGAATATCTGGAGTAATACACCCAAGGCTTGTTAACTCGCGGCTTGGGATAAACAGTGTCGCATTTGATAACATGTCAAATAAACTTGATGTTTCATCCCTTATTCACAATGAAACATCACAAATTATAGGGCTAACACCAAGCACTGGTTCAAATGTCCCTCACACAAGAATAATGTGGAGCAATGGAGCAATGTATAGTTCAACTGACTTGAACAACGGTTTCAGGCTTAATTATCTAAGCAACCATAACGAACCGCTTACACCTATGCATCTATACAATGAGTTTTCTGTTTCTGAGTTTGGAGGATCAGTAACAGAATCAAACGCCTTGGATGAAATTAAATACATATTCATTCAAACGACTTATGCAAACTCAGGTGATGGGAGGTTTATAATTCAGGCGCTTGATGCCAGTGGGTCTGTTTTGTCATCAAACTGGTATTCGCCTCAAAGCTTTAACTCAACGTTCCCGATAAGTGGATTCGTTAGGTTTGATGTTCCGACAGGTGCGAAGAAAATAAGATATGGATTTGTTAACAGTGCCAATTACACTGGCTCACTTAGATCGCACTTCATGTCTGGTTTTGCATATAATAAAAGGTTCTTCCTTAAAATATATGCTGTATACAATGACTTAGGTAGATATGGGCAATTCGAACCGCCATACTCGGTAGCTATTGATAGGTTTAGAGTTGGTGATAATACAACGCAAATGCCATCAATACCTGCGAGTTCAGCTACAGATGTAGCTGGAGTGAACGAGGTTATAAACTCACTACTTGCATCTTTGAAAGCAAATGGATTTATGAGTAGCTAA

Genome Context

Genome Context

Tertiary structure

1 / 5
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Genomics analysis of Klebsiella pneumoniae phage GH-K3 Cai,R. 2018-11 — GenBank
DepoCatalog: Mapping the Diversity of 105 Recombinant Klebsiella Phage Depolymerases Across Sequence, Structure, and Substrate Specificity DepoCatalog: Mapping the Diversity of 105 Recombinant Klebsiella Phage Depolymerases Across Sequence, Structure, and Substrate Specificity — https://doi.org/10.1101/2025.09.09.675204 bioRxiv