Protein

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Genbank accession
XHH73927.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MNYPNPPSPEITTKEKPAFKEITSELLRELENALNNATLWKEQVNLSLKGVKRILEVITGMDFFQKANEIDERLRGIVKWLENSSDGLQTKMREYESYFADFNTSMRSNEQEVTAILNANAENIKSEVKKLENQLIETTTKLLTSYQIFLNQARDNANNQITANKTQSLEAITQAKESATTQINTNKTQSLEAITQAKESATTQINTNKQEVLNNITQEKQQATSEITEAKKTAFNELLETLKPKFSGLFAGVYYIRNVIYIQGGWEQKIKDLSDYNLEKSKKYEIEVFFQFVSAKIVEKDLYFGLKVQEGFLKESIQKITHKYVSQIYYTKLLIENVSGVLSLYHGYFYPN
Physico‐chemical
properties
protein length:352 AA
molecular weight: 40465,28060 Da
isoelectric point:5,99676
aromaticity:0,09659
hydropathy:-0,57102

Domains

Domains [InterPro]
DC_0415
STR
3–182
DC_0415 Coil
Coil
Unmapped
114–141
Coil DC_0415
XHH73927.1
1 352
Architecture
STR
STR 3-352
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11509_1
[NCBI] 		3331679 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73927.1 [NCBI]
Genbank nucleotide accession
PQ159904.1 [NCBI]
CDS location
range 4957 -> 6015
strand -
CDS
ATGAATTATCCTAATCCACCAAGCCCAGAAATCACCACTAAAGAAAAACCAGCGTTTAAAGAAATCACAAGCGAGTTATTAAGAGAGCTTGAAAACGCTTTAAATAACGCTACATTATGGAAAGAGCAAGTTAATTTAAGCCTTAAAGGAGTGAAAAGGATTTTAGAAGTTATAACGGGCATGGATTTTTTCCAAAAAGCCAATGAAATTGATGAGAGATTGAGAGGGATCGTTAAATGGTTAGAAAATTCAAGCGATGGATTGCAAACTAAAATGCGAGAATATGAAAGCTATTTTGCTGATTTCAATACGAGCATGCGAAGTAACGAGCAAGAAGTAACCGCTATACTAAACGCCAACGCCGAAAACATCAAAAGCGAAGTTAAAAAGCTAGAAAATCAATTGATAGAAACCACTACCAAGCTTTTAACGAGCTATCAAATCTTTTTAAACCAAGCCAGAGATAACGCTAATAACCAAATCACCGCAAACAAAACCCAAAGCCTTGAAGCGATTACGCAAGCTAAAGAAAGCGCTACCACTCAAATAAACACCAATAAAACCCAAAGCCTTGAAGCGATTACGCAAGCTAAAGAAAGCGCTACCACTCAAATAAACACCAATAAGCAAGAAGTTTTAAACAATATCACGCAAGAAAAACAACAAGCCACAAGCGAGATCACCGAAGCGAAAAAAACCGCGTTTAACGAACTTTTAGAAACCTTGAAGCCGAAGTTTAGCGGCTTGTTTGCGGGCGTTTATTACATTAGGAATGTGATTTATATCCAAGGCGGATGGGAACAAAAGATCAAGGATTTAAGCGATTATAATCTAGAGAAAAGCAAGAAATACGAAATAGAAGTATTTTTCCAATTTGTGAGCGCAAAAATTGTAGAAAAAGATTTGTATTTTGGACTGAAAGTGCAAGAAGGCTTTTTGAAAGAAAGCATCCAAAAGATCACGCATAAGTATGTATCGCAAATTTACTATACAAAGCTTTTAATAGAGAATGTGAGCGGTGTTTTAAGCTTGTATCATGGCTATTTTTACCCAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
85ea7414f5c22bd89a2deff236a048f34ba5d7fc35b3df0224d9eea0cbe9a3e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank