Protein

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Genbank accession
WXX03190.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,68
Protein sequence
MEVQGSLGRQIQGISQQPPAVRLQGQCTDMVNMVPDVVDGTKSRMGTVHIARLMDSATDDMALHHYRRGDDNEEYFFFLKKGAVPEIYDKAGNRCPLSSRDAPMTYLNEVQNPREDVQFMTIADVTFMLNRRKVVKARQDKAPEVGSTAIVFCAYGQYGTNYSISLDGTTVASFKTPDGSSAEQVEEIRTGAIASKLYESIQQHALITGGTYSVQLEDTCIYIIRNDGSRDFTVSTTDGAKGKDLVAIKYKVSSTDLLPSHAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVTWKETVAAGAQLGFDKSTMPYIIERTSVVNGIAQFTIRQGDWEDRKVGDDLTNPMPSFIDDEVPQTIGGMFMVQNRFCVTAGEAVIMTRTSRFFDFFRYTVLSALDTDPIDIFSDASEVYQLKHAITLDGDTVLFSDNSQFILPGDKALTKDNALLRPTTAFEVNNHVRPVATGESVMFATSEGAYSGVREFYTDSYTDTKKAQPITSHVNRLLEGNIISMVASSNINRLLVLTDKKRNVAYVYDWLWQGTERVQAAWHKWVWPSDARLCGMFYSSETLYVIIERGTSGVFLEKMDMGDALEYHLDDRIRLDRRTLISFAYDQGSDGWYSSRLPWEVNHPELLECVITKGWPAYTGGSFLFQHEDEGNRLYTTFDLGEESSIVHCVVGELYSQEFEPTPVIIKDSQERTSYIDVPTIGLVHLNMDKYPDFTVEVTNTQSGKTRTVKVANRRGGALSNRVGYVKPFEGVVRFPLRAKSTDVTYRLKSTAPHTLQLRDIEWEGTYNPSKRRV
Physico‐chemical
properties
protein length:803 AA
molecular weight: 90215,54340 Da
isoelectric point:5,44827
aromaticity:0,09963
hydropathy:-0,37646

Domains

Domains [InterPro]
IPR058003
TTP
3–802
IPR058003
WXX03190.1
1 803
Architecture
TTP
TTP 3-802 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXX03190.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9805
Central domain 139 337 200 0,1619
C-terminal 338 803 465 0,2676
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalP_SE29
[NCBI] 		3134913 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Zindervirus
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXX03190.1 [NCBI]
Genbank nucleotide accession
PP526725 [NCBI]
CDS location
range 26830 -> 29241
strand +
CDS
ATGGAGGTACAAGGTTCATTAGGTAGGCAGATTCAAGGGATCAGCCAACAGCCGCCAGCAGTGCGATTACAAGGCCAATGCACGGACATGGTGAACATGGTTCCCGATGTTGTTGACGGAACCAAGTCACGAATGGGAACAGTCCATATTGCCAGATTAATGGATTCGGCAACAGATGACATGGCGCTACACCATTATCGTCGAGGAGATGATAACGAAGAGTATTTCTTCTTCTTGAAGAAAGGTGCTGTACCTGAAATTTACGACAAAGCAGGGAATCGTTGTCCACTATCCTCGCGGGATGCACCTATGACGTATCTTAATGAAGTGCAGAATCCGAGAGAGGATGTGCAGTTTATGACAATCGCTGACGTTACATTTATGCTTAACCGCCGAAAGGTAGTCAAAGCCAGACAAGATAAAGCGCCAGAGGTTGGCTCTACTGCAATCGTATTCTGTGCTTATGGTCAGTATGGTACGAATTACAGCATAAGTTTAGATGGAACCACTGTAGCTTCATTCAAAACACCTGATGGTAGTAGTGCGGAGCAGGTTGAAGAAATCAGAACGGGAGCCATCGCAAGTAAACTTTACGAGTCGATACAGCAGCACGCACTCATCACGGGAGGTACTTACAGCGTTCAGCTTGAAGATACCTGCATCTACATCATACGAAATGATGGAAGCAGAGACTTCACGGTATCAACCACAGACGGTGCTAAGGGCAAAGACTTAGTTGCGATCAAGTACAAAGTGTCATCTACTGACCTTCTACCCTCTCATGCCCCAGCGGGCTATAAGGTGCAAGTGTGGCCTACCGGAAGTAAGCCTGAATCTCGATACTGGTTACAGGCAGAGCCGAAGGAGGGCAACCTTGTAACTTGGAAGGAGACGGTGGCAGCAGGTGCGCAGTTGGGTTTTGACAAGTCAACAATGCCCTACATTATCGAACGCACCAGTGTCGTTAACGGTATTGCACAGTTCACTATTCGCCAAGGGGATTGGGAGGACCGGAAAGTAGGTGACGACTTGACTAACCCTATGCCTTCCTTCATTGATGATGAGGTTCCTCAGACAATTGGTGGGATGTTCATGGTGCAGAACCGATTCTGCGTAACCGCAGGTGAGGCGGTCATCATGACTCGTACTTCTCGCTTCTTCGACTTCTTCCGGTACACTGTGTTATCCGCATTAGATACAGACCCAATCGACATCTTCTCAGATGCGAGTGAGGTATACCAGTTAAAACATGCAATAACCTTGGACGGAGACACTGTGTTATTCTCAGATAACTCTCAGTTCATCCTGCCAGGAGATAAGGCGCTTACCAAGGATAATGCACTTCTTAGGCCAACTACAGCTTTTGAGGTGAATAACCATGTAAGGCCAGTTGCTACAGGCGAGTCTGTAATGTTCGCAACTAGTGAAGGTGCGTACTCTGGTGTTCGTGAGTTCTACACAGATTCATATACTGACACTAAGAAGGCGCAGCCCATCACAAGTCATGTGAACCGACTGTTGGAAGGTAATATCATCTCAATGGTTGCTAGCTCTAACATCAACCGACTCCTTGTCCTTACCGACAAGAAACGGAATGTAGCATATGTGTACGACTGGTTGTGGCAAGGGACTGAGCGAGTACAGGCAGCATGGCATAAGTGGGTGTGGCCTAGCGATGCGAGACTTTGCGGTATGTTCTATTCTAGTGAGACTCTGTATGTCATCATTGAGCGTGGCACATCTGGTGTATTCCTTGAGAAGATGGATATGGGCGATGCCTTGGAGTATCACTTAGATGATCGCATCCGTCTTGACCGTCGAACGCTTATCTCGTTTGCATATGACCAAGGCTCTGACGGTTGGTATTCCAGCCGCCTTCCTTGGGAGGTGAACCACCCAGAACTTCTGGAATGTGTCATCACTAAAGGTTGGCCTGCGTACACTGGTGGCTCTTTCCTGTTCCAGCATGAAGATGAGGGAAACCGATTATACACAACCTTCGACTTAGGGGAGGAGAGCTCCATAGTCCATTGTGTGGTTGGTGAGCTTTACTCTCAGGAGTTTGAGCCTACACCTGTTATCATCAAGGACTCGCAAGAGCGTACCTCGTACATTGACGTTCCGACCATTGGGCTTGTTCACCTAAACATGGATAAGTACCCTGACTTCACTGTCGAAGTTACTAACACCCAGAGTGGCAAAACACGCACAGTTAAGGTAGCTAACCGTAGAGGCGGTGCTCTCTCAAACCGAGTAGGTTACGTGAAGCCCTTTGAAGGTGTGGTTCGGTTCCCGTTACGTGCGAAGAGTACGGATGTGACATACCGGCTTAAGTCTACAGCGCCGCACACATTGCAGCTACGTGACATTGAATGGGAAGGTACATACAATCCAAGTAAGCGGAGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac289262381e64f02ddff0bd65daf5a25102d1ae258604cc35089bdf8f7cd100
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3315
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Study on the Mechanism of Salmonella Phage vB_SalP_SE29 Recognizing the Surface Receptor of Host Bacteria Zhang,L., Liang,S. and Liang,R. 2010-11 — GenBank