Protein

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Genbank accession
QIG65994.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MNVIHNSYLLDFMDNPFIDAHHELISNWKWINFASGWYGFNIRRSHNGGITLMQRGGIRQNFFENQKHQFSTVFFEMRVKKLDNQSFPSPNIGITIHTTNDSVFFPALNTHMHYVNYSPHDREWLLKGEMDINDSIDHITITNNDSIEIDVNKIRFSPIPFHEHVMADYGYLTGNNCRDHIEYIDVQPHTGISTNIHEVEFEVPLLTCPTFNVMNVQKENKGVLGIKNVNFGALNDKAVLTYSTSNIEKKSTFIVYFSIEPLEI
Physico‐chemical
properties
protein length:264 AA
molecular weight: 30613,15510 Da
isoelectric point:5,78845
aromaticity:0,12121
hydropathy:-0,34735

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG65994.1
1 264
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0010
Central domain 11 209 200 0,0035
C-terminal 210 264 54 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-264

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65994.1 [NCBI]
Genbank nucleotide accession
MT028491.1 [NCBI]
CDS location
range 186687 -> 187481
strand +
CDS
ATGAATGTAATTCATAATTCTTATTTGTTGGATTTTATGGACAATCCATTTATTGATGCTCATCATGAACTTATCAGTAATTGGAAATGGATAAATTTTGCTTCTGGTTGGTATGGCTTTAACATTAGGAGAAGTCATAATGGAGGTATTACCCTTATGCAAAGGGGTGGTATTAGACAAAATTTCTTTGAAAACCAAAAACATCAGTTTTCAACTGTTTTCTTTGAAATGCGAGTAAAGAAGCTTGACAACCAATCGTTTCCTTCTCCCAATATTGGAATCACAATCCACACAACGAATGATTCGGTATTTTTTCCAGCCCTGAACACACATATGCATTATGTCAATTATAGTCCACATGATCGTGAATGGCTTCTTAAGGGAGAAATGGATATAAACGACTCAATCGATCATATTACCATCACCAACAATGATAGTATAGAAATTGATGTTAATAAAATTCGTTTTTCCCCGATCCCGTTTCATGAACATGTAATGGCAGACTATGGATATCTCACAGGAAACAATTGTCGTGACCATATCGAATATATTGACGTTCAACCTCATACTGGAATATCCACCAATATTCATGAAGTTGAATTCGAAGTTCCATTGTTAACCTGTCCAACTTTTAATGTAATGAATGTGCAAAAAGAAAATAAAGGGGTTTTGGGTATTAAAAATGTTAACTTTGGTGCCTTGAATGACAAGGCTGTATTAACATACTCAACTTCTAATATTGAAAAGAAGTCAACATTCATTGTATATTTTAGTATTGAACCATTAGAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf8b246199dded51b2c434054455a360b669798ffe6cdcc0d8f84947a99e775e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6007
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank