Protein

View in Explore
Genbank accession
QJT70815.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MKLIGLTLQGQFTRQDVVVNGVYLNKDKTYWFKPSELSGSIHSLLELESRLGIKVESKVVEDTYDLKRIGIRRAKSGEYTFREHKLTGSNVWFQPKDLSKKEWDKLFDMSRLGSIDLIIEDDPFLVQRNDTLTKMLSPKILVPKYTRVVIIGASIMAGSHNTEARRKVAVDTYADNGITMEVVDRASSGKSTTWVLDNIDTLLDDLMDRAEETLVFLHIGGNDLSTVNPYPHNADTIESNVRAIIGNIKGRGMGCAMSPLTKRIDPSTKRSAPYNENIYIPLIKELLPEWVDSAGNPVIDLYNAMGDNPEWYSADGVHPSTAGTTGIATYIAQQISTVVPKDTVVEPSQPVTPPTVPGTYITDAVINISLPEASNGRNHMDGDKNKIIVNSDKTTVALNGVYNNVGDGSLVENATLSISGEIGGINTAGRAVEENDSGDLFDKGCTRDSVWTIGGAITVNLDSGVNPTDSYRVELLACRVTTDDRTGEYTVGGVTKEINGGLDPWGTDVWSGVTGQQLLDNGITFQPKSGVSYAYLNAFRITKE
Physico‐chemical
properties
protein length:544 AA
molecular weight: 59417,16380 Da
isoelectric point:5,00822
aromaticity:0,06801
hydropathy:-0,30221

Domains

Domains [InterPro]
SSF52266
STR
135–335
SSF52266
IPR036514
STR
140–335
IPR036514
IPR053140
Unmapped
144–337
IPR053140
IPR036514
STR
146–339
IPR036514
cd00229
ENZ
148–335
cd00229
IPR013830
ENZ
151–323
IPR013830
QJT70815.1
1 544
Architecture
STR
STR 135-339 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJT70815.1
1 544
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9927
Central domain 145 373 230 0,5289
C-terminal 374 544 170 0,6116
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-373
C-terminal
374-544

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VcorM_GR7B
[NCBI] 		2711165 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT70815.1 [NCBI]
Genbank nucleotide accession
MT366760.1 [NCBI]
CDS location
range 10332 -> 11966
strand -
CDS
ATGAAGCTAATAGGATTAACACTGCAAGGGCAATTTACCCGCCAAGATGTTGTTGTTAATGGTGTATATCTAAACAAGGATAAAACATATTGGTTCAAACCAAGTGAATTATCTGGGTCGATACATAGTCTGTTAGAACTTGAAAGTAGACTAGGTATCAAGGTTGAATCTAAAGTTGTTGAGGATACATACGACCTGAAACGTATTGGTATCCGCCGTGCTAAATCAGGTGAATACACTTTTAGAGAACACAAGCTCACTGGTTCTAATGTATGGTTCCAACCAAAGGATTTGTCAAAGAAGGAATGGGACAAACTATTCGACATGAGTAGACTTGGTTCTATTGATCTGATTATAGAAGACGACCCCTTCTTAGTTCAGCGAAACGATACTCTGACTAAAATGTTGTCACCGAAGATACTCGTTCCTAAATACACACGAGTAGTTATTATTGGTGCCTCGATTATGGCTGGTTCTCACAACACGGAAGCACGACGTAAGGTAGCAGTCGATACCTACGCGGATAATGGTATCACTATGGAAGTGGTGGACAGAGCTAGTTCTGGTAAATCAACTACATGGGTTCTTGACAACATTGATACGTTACTTGATGATCTGATGGATAGAGCTGAGGAAACGTTGGTGTTCCTACACATCGGTGGTAATGATTTATCAACGGTTAACCCTTATCCCCATAACGCTGATACGATTGAGAGTAACGTACGCGCCATTATCGGTAATATCAAGGGTCGTGGTATGGGTTGTGCAATGAGTCCATTGACCAAGCGAATTGACCCTTCTACCAAGAGGTCAGCACCCTACAACGAAAATATCTATATCCCATTAATTAAAGAACTATTACCAGAGTGGGTTGACTCAGCGGGTAATCCAGTCATCGATCTGTACAATGCTATGGGTGACAACCCAGAATGGTACAGTGCTGATGGTGTCCACCCTTCAACAGCGGGTACTACGGGTATAGCTACGTACATTGCTCAACAGATTTCTACAGTTGTCCCTAAAGATACTGTAGTCGAACCCTCACAACCAGTTACGCCACCAACAGTTCCTGGTACGTATATCACAGATGCTGTAATCAACATTAGCTTACCGGAAGCCTCTAATGGTCGTAACCATATGGACGGTGACAAGAACAAGATTATTGTTAATAGCGACAAAACGACTGTAGCCCTTAATGGGGTTTACAATAATGTCGGTGATGGTTCACTAGTCGAAAATGCGACATTATCTATATCTGGAGAAATCGGTGGTATTAATACCGCAGGTAGGGCAGTGGAAGAAAATGATTCGGGTGACTTATTCGATAAAGGTTGTACACGAGACAGCGTATGGACAATAGGTGGTGCGATTACGGTTAATCTGGATAGTGGTGTGAATCCAACTGATTCCTACCGTGTCGAACTACTGGCGTGCCGTGTAACTACGGATGACAGAACGGGTGAATACACAGTGGGCGGTGTTACTAAGGAAATAAATGGTGGACTAGACCCTTGGGGCACTGATGTATGGTCAGGTGTGACGGGTCAGCAGCTATTGGACAATGGCATAACCTTCCAACCTAAATCGGGTGTAAGCTATGCCTATCTGAACGCATTCCGTATAACCAAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f53659e4172005ff6472c61e78d614500a9b82f81ec09a271a0809f8701abf4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of Vibrio coralliilyticus phages from Hawaiian seawater Richards,G.P. 2017-10-12 — GenBank