Protein

View in Explore
Genbank accession
YP_010646009.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQIWIHDRSMRKVCALNNEIPGILPYTNSQWHTYFEYSTSTFDFMIPKIVNGKLHDDIKYINDQMYVSFYYDNSYHVFYVAKIVDNDMNFQVTCNNTNLELAMETARPLASSNGPQKLEWYLQNLDLLGFAGLEVGFNEVSDETRTITFESQSGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYHRPDENHHGIGKVRGDVTLYYQTGLKGVQVTSDKTQLFNLGYFVGQDGVNLNDVEFEEKNELGQVEFYSKKGSSAIYAPLSMEMFPSTINEGNGDRWTRKDFQTEYKDVNALKAYALRTIKQYAYPLMTYTVDVNSSFIENYKDINLGDSVKIINNNFIGGLALESRVSEMIISFDMPKNNSVVFTNYRKLDNRPSGELQQRIGEIVSKSLPYQVEIRTTNGTVFKNGVGHSTVKPILKQGDKIVNATYRFVIDGTIKYSGMTYDMVASEITQPTALTVSAFVDNKEVASKEITFLNISDGKQGPKGERGEKGPKGDRGNDGLPGKDGVGLKTTAVTYGLSDSDSTQPTNWTSQPPTLIKGKYLWTKTVWTYTDSSIETGYQKTYIAKDGKDGNDGIAGKDGVGIKKTTITYAQGTSGTVAPTNGWSSQVPNVPADQYLWTKTVWGYTDGTNETGYSVAKMGKQGPKGERGEKGPKGDQGIPGPKGADGKTQYTHIAYADTISGSGFSQTDTNKAYIGMYQDFNAEDSNNPQDYRWSKWKGSDGKDGIPGKAGADGRTPYVHFAYADSADGRTGFSLTQTGSKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGDNLITNSSFPKNLDGWGVWETGLSNENLHISTHKFYYNGARNLFRLDNNGKKEVPAASRRFKVKRNTDYSFNIQIFATGNLQSVKIYFLGRKANETGKIFTKAVDLKTHTGSPSTTQTVKWHLTFNSGECDEGFIRIDNNGTTDGSQSMLFFAELDCYEGTTDRSWQASPKDLKDEIDTKADNVLTQAQLNKLSETNSVMKAELEAKASLDTLNQWVKAYQDFVNANSADRAQAEKSLADASARVAKLENNLNDMSERWNFIDNYMAASNDGFVIGKKDNSSSIMFNPNGRISMFSAGNEVMYISQGVIHIENGIFSKTVQIGRFREEQDIINPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1152 AA
molecular weight: 128302,12800 Da
isoelectric point:5,76708
aromaticity:0,10764
hydropathy:-0,60964

Domains

Domains [InterPro]
DC_0255
STR
1–1152
DC_0255
IPR010572
ENZ
142–381
IPR010572 PTHR24637 Coil
G3DSA:1.20.5.320
STR
492–541
G3DSA:1.20.5.320 G3DSA:1.20.5.320
YP_010646009.1
1 1152
Architecture
STR
STR 1-1152
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC879
[NCBI] 		2365045 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010646009.1 [NCBI]
Genbank nucleotide accession
NC_070676.1 [NCBI]
CDS location
range 14944 -> 18402
strand +
CDS
ATGCAAATTTGGATTCATGACAGAAGCATGCGCAAAGTGTGCGCATTGAATAATGAAATTCCAGGAATATTGCCATATACGAACAGTCAGTGGCACACCTACTTTGAATACTCAACCAGTACATTTGACTTTATGATTCCTAAAATTGTAAATGGAAAACTTCACGATGATATCAAATACATCAATGATCAGATGTATGTGTCGTTTTACTATGATAACTCTTACCACGTTTTCTATGTGGCTAAGATTGTTGATAATGATATGAACTTCCAAGTGACTTGTAACAATACCAATCTTGAATTAGCAATGGAAACTGCACGTCCTCTTGCTAGCAGTAATGGACCTCAGAAATTAGAGTGGTATCTTCAAAATCTTGATTTACTTGGTTTTGCTGGTCTTGAAGTTGGCTTCAATGAGGTTTCTGATGAAACAAGAACTATCACGTTCGAGTCTCAAAGTGGTACAAAACTAGAACAGCTTCATAGCTTGATGAATCAATTCGATGCAGAGTTTGTTTTCCGTACAGATTTAAATCGAGATGGTACTTTGAAAAAATTTGTCATTGATATTTACCACCGTCCTGACGAAAACCATCACGGTATTGGTAAGGTTCGAGGAGATGTAACCCTTTACTATCAAACAGGTTTGAAAGGCGTTCAAGTTACTAGTGATAAAACGCAACTATTCAACTTGGGTTACTTTGTCGGTCAGGATGGTGTCAATCTTAACGATGTTGAATTTGAGGAGAAAAACGAGCTTGGACAAGTTGAGTTCTACTCAAAAAAAGGTTCGTCTGCGATATATGCACCTCTTTCAATGGAAATGTTTCCTTCTACAATTAATGAAGGTAATGGTGATCGTTGGACACGCAAGGATTTTCAAACAGAGTACAAAGATGTCAACGCCCTAAAGGCTTATGCCTTACGTACTATCAAGCAGTATGCTTATCCACTAATGACCTATACCGTAGACGTTAACTCTAGTTTCATTGAAAACTACAAAGACATCAATCTGGGTGATTCTGTTAAGATTATTAATAATAATTTTATAGGTGGTCTAGCCCTCGAATCTCGTGTGTCTGAAATGATAATCAGTTTTGACATGCCAAAAAACAACTCAGTTGTTTTTACCAATTACAGAAAGTTGGATAATAGACCATCTGGAGAATTACAACAACGCATCGGTGAGATTGTTTCTAAATCATTGCCATATCAAGTTGAAATAAGGACAACGAACGGTACAGTATTTAAAAACGGAGTTGGCCATTCTACTGTTAAACCCATCTTGAAACAAGGCGATAAAATCGTTAATGCAACATATAGATTTGTAATTGACGGTACTATTAAATACTCAGGTATGACCTATGATATGGTAGCATCAGAGATTACACAACCGACTGCCTTAACGGTTTCGGCATTTGTAGATAACAAAGAAGTAGCTTCAAAAGAAATTACTTTTTTAAATATATCAGATGGTAAACAAGGACCAAAAGGTGAACGTGGTGAAAAAGGACCTAAAGGCGATAGAGGTAACGACGGCTTACCTGGTAAAGACGGGGTAGGCTTAAAAACCACCGCCGTTACTTACGGTCTAAGTGATTCTGATTCTACTCAACCTACTAACTGGACCAGTCAACCACCAACTTTAATTAAAGGGAAATACCTATGGACCAAAACAGTATGGACATATACGGACTCATCTATTGAAACTGGGTATCAAAAGACTTATATTGCTAAAGATGGTAAGGACGGCAATGACGGTATAGCTGGTAAGGACGGCGTAGGAATTAAAAAAACCACAATTACTTACGCACAAGGAACATCTGGAACGGTAGCACCAACGAATGGCTGGAGTAGTCAAGTACCGAATGTACCTGCTGATCAATACTTATGGACTAAGACGGTATGGGGCTATACAGACGGTACGAATGAAACTGGATATTCAGTAGCTAAAATGGGTAAACAAGGACCAAAAGGTGAACGTGGTGAAAAAGGACCTAAAGGTGACCAAGGGATTCCTGGACCTAAAGGAGCAGACGGAAAAACGCAATATACACATATCGCTTACGCTGATACAATTTCTGGCAGTGGTTTTAGTCAAACAGATACTAATAAGGCCTATATTGGTATGTACCAAGACTTCAATGCCGAAGATAGCAACAACCCACAAGATTATCGATGGAGCAAATGGAAAGGTAGCGATGGTAAAGATGGTATTCCAGGTAAAGCTGGAGCAGATGGCAGAACACCTTACGTTCACTTTGCTTATGCAGACAGTGCCGATGGTAGAACTGGTTTCAGTTTGACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACTAATCCATCGGATTATACATGGAATGATACCGCTGGTAGCGTTTCGGTTGGCGGTGATAATTTAATCACTAACTCATCTTTCCCAAAAAATCTTGACGGATGGGGAGTTTGGGAAACGGGATTGTCTAACGAAAATCTTCATATATCAACACATAAATTTTATTACAACGGTGCAAGAAATCTATTTAGACTAGATAATAACGGCAAGAAGGAAGTTCCTGCTGCATCAAGACGTTTTAAAGTTAAACGCAATACAGATTATTCGTTTAATATTCAGATATTTGCAACCGGAAACCTCCAGAGCGTTAAAATCTATTTTTTGGGTCGTAAGGCGAATGAAACTGGCAAGATATTTACTAAAGCGGTCGACTTAAAAACACATACAGGTTCACCATCGACAACACAAACGGTTAAATGGCATCTAACATTTAACTCTGGAGAGTGTGATGAAGGGTTCATTCGTATTGATAACAATGGCACTACTGACGGCAGTCAGTCGATGTTATTTTTTGCAGAACTAGACTGCTATGAGGGTACTACTGATAGATCGTGGCAAGCGTCACCGAAAGACTTGAAGGACGAGATAGACACTAAGGCCGACAATGTATTAACGCAGGCCCAGCTTAATAAATTAAGTGAAACTAATTCGGTGATGAAAGCGGAATTAGAAGCCAAAGCGTCTCTTGATACGCTCAATCAATGGGTCAAGGCTTATCAAGATTTTGTTAATGCAAACAGCGCAGATCGCGCACAGGCTGAAAAGAGTCTTGCAGACGCTAGTGCTCGTGTCGCAAAACTAGAGAATAATCTGAATGATATGTCAGAGCGTTGGAATTTTATCGATAACTACATGGCAGCATCAAATGATGGTTTTGTCATCGGGAAAAAAGATAACTCCAGCTCTATTATGTTCAATCCAAATGGGCGTATATCAATGTTTTCAGCTGGTAATGAGGTAATGTATATCTCTCAGGGTGTGATTCACATTGAGAACGGTATTTTTTCTAAAACAGTTCAGATTGGACGATTCCGAGAAGAGCAAGATATTATTAATCCTGATAGGAATGTCATAAGATATGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5290578a33c1b6bfd3ab1210681d29f9e2efe08412627a232279f29637d1146e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7511
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank