Protein

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Genbank accession
XOD43447.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKVVYLWKNGQAIIVHKNEEDEYVYPDEKWTENQPPQGIILPCYYDGKQWVGQTQDELEKMLPEVEIPVDDKDIAIAKLTSLVVDLQEEVMSLKQNIALITEEQANQKLGEA
Physico‐chemical
properties
protein length:112 AA
molecular weight: 12902,49410 Da
isoelectric point:4,31649
aromaticity:0,07143
hydropathy:-0,51250

Domains

Domains [InterPro]
DC_0222
STR
1–112
DC_0222
Coil
Unmapped
76–103
Coil
XOD43447.1
1 112
Architecture
STR
STR 1-112
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SepS_E72m5
[NCBI] 		3398617 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD43447.1 [NCBI]
Genbank nucleotide accession
PV036961.1 [NCBI]
CDS location
range 19482 -> 19820
strand +
CDS
ATGAAAGTAGTTTATTTATGGAAAAATGGACAAGCAATTATTGTTCACAAAAACGAAGAAGATGAATATGTTTATCCTGATGAAAAATGGACAGAGAACCAACCTCCTCAAGGTATCATCTTACCTTGCTATTATGACGGTAAACAATGGGTTGGACAAACCCAAGATGAGCTAGAAAAGATGTTGCCTGAAGTAGAAATTCCTGTTGATGACAAAGATATTGCTATAGCTAAATTAACTAGCTTAGTTGTCGATTTACAAGAAGAGGTTATGAGTTTGAAGCAGAACATCGCACTAATAACTGAAGAACAAGCAAATCAAAAATTGGGGGAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
401feea84fecd7b738bb1377fbcd81312d29d3a9660cd6a1e890cf144363f0ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virion content unpacked by long-read sequencing: Stress-induced changes in transmitted staphylococcal mobilome due to phage-satellite interactions Botka,T., Smetanova,S., Vinco,A., Kucerova,E., Rovnakova,K., Sivakova,A., Maslanova,I. and Pantucek,R. — — GenBank