Protein

View in Explore

Genbank accession

WWQ70278.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,96

Protein sequence

MSSGGGKAKTPTLLNDNLYHKQFYRVLDILSEGPIYGPVNQKAPLNSVMLNDTPITDANGNTSVPGVSVAWRNGTADQSPINGFNAIESTVIVNAKVTHDTPIIRTISDPNVNRVRLNLGVDSLVQSDDKGNQYNTSVTLMVDVKPSSSTTWSLVKDIHIGPGKQSGEYLEAHIIKAPDEKPFDIRVRRVTPDSTGDLLHNDTRWSSYSEIIDDNLSYPHTAVAGAVIDHDQYTDTPTRTYHMRGLIVDVPDNYDPETRTYSGLWLGGFKKAYTNNPAWLFRYLVKNERFGLARHAGYIDIDDGALYTLSQYCDQLVNDGYGGFEPRMTLNAYITEQMSARDLLDNIAGMFRGIALWDGQRLTVMIDAPQDPIATITNANVVDGAFTRSSIARAESYNAVIVSWTDPENGWEQSKEYVADDELIARDGYNETTLEAFGCTSRGQAYRAGKWLIETAKREPSKFTFKMARDAIHFTPGDIIEILDNNRAGARLGGRIVANNGKVITVDKVDSDLVAAGDTISLLDSDGKFKKHQITGVNGNNITLAAAPAWIRNGTVFAVSTESAKPVLCRITSVAETENNSVYTIEAAQHDTHKQAVVDEGAIFEVNNDTLNHFRVPNIENLKVLNVGSETVQCRATWETQTTTHRLTFEIRVYNAEGRVVAAYETTNYRYDFYGLDAGSYTLGIRGRNDTGMKGAESIVDLVIGAPAAPIGVNWVPGVFQATVYPISKTTLTTDTAYEFYFSGENQITDPSKVTTLAQFTGRGYQWTFGGMNTGHTYYVYVRTRNAFGVSDFVEASGKPTENFDEISDYVTKDVINSEQFKGMIGDIKDLGDRADLIESATNDLKNATDSLKTATDNLTNITEDLRTDTDGLITETGAIKADTDTLKKETEDLYKKVGENTDGIGQHEVRIDSLEVSSERIDSELAQAKASLQNASLALINNSLAQTNTRVTLTAQYKKGKSETNAQIDRIDNVIAEEKKATAESLKTITAEMNTMDSNLKSQISSVERAVADETSARAEAINSVNASISNLDKKTDASVNRLDQAIADETSARSQAISGVNASISNLESKTDASVSRLDKAISDETQARSDAITEVKADLTTLESNTNASVKRLDQAIADESSARAQAISGISAELGKVENNVDKNSDEISQTKASLQNASIALINNSIAQTNTRVTLTAQYKKGRSETNAQIDRIDNVIAEEKKATAEAVSVVKASITDLDKKTDASVSRLDKAIADETSARSEAVSDVNASVSALDKKTDASVKRLDQAIADETSARTEAISGVNASINTLESNTESEVNRIDQAIADEASARAQAISGVNASISTLDSKVTSNVTRIDKAIADETKARTDAISSLNSSLTSTINSKVSEVSTALSTHEASSAEKFGQISASFESVNSSITEWSQAMTTADDALSTKIDQLTVTVNGNTTAIETTSKALTDFKGNVDASYSIKLATDNNGMKYATGMSLGLTGDGTNFQSQCIFLVDRFALMTAANGTYQTPFYIENGAMYVREAFIKNGSIDNAKIGNVITSYNWNGNDQGWAIVKDGWAVFNNVTVRGTVYANAGVFNGTVYANDGKFSGTVEANSFIGDVANMYTGSDVSRSNNGVLQKVITYTDTTAAAHRRHICVMANVKGNGACTVNINGSEKGLSVNDNERLIMHSAAVYGQNVTVVISISAQNGRGAYIFSPTVIVSRGSGSFSG

Physico‐chemical properties

protein length:	1707 AA
molecular weight:	184379,72400 Da
isoelectric point:	4,92626
aromaticity:	0,06503
hydropathy:	-0,36942

Domains

Domains [InterPro]

IPR053171
Unmapped
1–1159

IPR053171 DC_2097 IPR015406

DC_0129
STR
10–962

DC_0129 DC_2322 DC_0738 DC_1904

IPR055385
ATT
88–214

IPR055385 IPR032876 IPR055383 IPR057587 Coil DC_2097

WWQ70278.1

1 1707

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

RBD

STR 10-87 | ATT 88-214 | STR 215-334 | ATT 335-496 | STR 497-708 | ATT 709-811 | STR 812-962 | STR 994-1344 | RBD 1345-1707

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	1	1159	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	10	962	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	88	214	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	335	496	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR055383	STR	DC_0003	609	707	InterPro cluster	Tip attachment protein J, Fn3-1 domain	Central	High	Text match	998 proteins / 1603 hits
IPR057587	ATT	DC_0130	709	811	InterPro cluster	Tip attachment protein J, second Ig-like domain	Central	Medium	Text match	309 proteins / 309 hits
Coil	Unmapped	-	838	865	Coils	Coil	-	-	-	-
DC_2322	STR	DC_2322	994	1037	Novel HMM	DC_2322	Central	Low	Positional only	13 proteins / 13 hits
DC_2097	STR	DC_2097	1033	1165	Novel HMM	DC_2097	Central	Low	Positional only	14 proteins / 14 hits
DC_0738	STR	DC_0738	1144	1228	Novel HMM	DC_0738	Central	Low	Positional only	12 proteins / 12 hits
DC_2097	STR	DC_2097	1224	1344	Novel HMM	DC_2097	Central	Low	Positional only	14 proteins / 14 hits
DC_1904	RBD	DC_1904	1329	1707	Novel HMM	DC_1904	C-terminal	Low	Positional only	28 proteins / 28 hits
IPR015406	RBD	DC_0135	1435	1571	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage mEp010 [NCBI]	3121467	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Escherichia coli K-12 [NCBI]	83333	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Genbank protein accession

WWQ70278.1 [NCBI]

Genbank nucleotide accession

PP180001.1 [NCBI]

CDS location

range 46117 -> 51240
strand +

CDS

ATGAGTAGCGGCGGCGGCAAAGCCAAAACACCAACATTATTAAACGATAACCTGTATCATAAACAGTTTTATCGTGTTTTAGACATTCTCAGTGAGGGGCCAATATACGGCCCTGTAAACCAGAAAGCGCCATTAAACAGCGTAATGCTTAATGACACGCCTATCACTGACGCCAACGGTAATACATCAGTCCCCGGCGTTAGCGTGGCGTGGCGCAATGGTACGGCTGACCAGTCACCAATCAACGGCTTCAACGCCATTGAATCAACCGTTATTGTCAACGCAAAAGTAACTCACGATACACCAATAATCAGGACCATTTCAGATCCCAACGTTAACCGCGTAAGGCTGAATCTTGGCGTCGATTCTCTGGTTCAGTCAGATGATAAGGGCAATCAGTACAATACATCCGTCACGTTGATGGTTGATGTTAAGCCTTCATCTTCAACAACGTGGTCACTGGTTAAAGATATTCACATCGGCCCGGGTAAACAAAGCGGCGAGTACCTCGAAGCGCACATCATCAAAGCGCCGGATGAAAAACCGTTTGATATTCGCGTTCGTCGCGTAACGCCGGACAGCACGGGAGATCTTCTTCACAATGATACCAGGTGGAGCAGTTACAGCGAGATAATCGACGATAATTTATCTTATCCTCACACCGCTGTAGCAGGCGCGGTAATTGACCACGATCAGTATACTGACACGCCGACACGCACCTATCACATGCGTGGTCTGATTGTTGATGTCCCTGATAACTACGACCCGGAAACGCGCACGTACTCAGGTTTATGGCTTGGTGGCTTTAAAAAGGCGTACACCAATAACCCTGCATGGCTTTTCCGGTATCTGGTTAAAAATGAACGCTTCGGGCTTGCCCGCCACGCTGGTTACATCGACATTGATGACGGAGCACTGTATACGCTTTCTCAATACTGCGACCAGTTGGTAAACGACGGTTACGGCGGCTTTGAACCTCGCATGACGCTTAATGCTTACATCACTGAGCAAATGAGCGCCCGCGACCTACTGGATAATATTGCAGGCATGTTCCGTGGTATCGCGTTATGGGACGGGCAGCGCCTTACGGTGATGATTGATGCACCGCAGGATCCAATTGCCACCATCACAAATGCCAATGTCGTTGATGGCGCGTTTACTCGTTCAAGTATCGCCCGCGCAGAATCTTACAACGCCGTGATCGTGTCATGGACTGACCCGGAAAACGGTTGGGAACAATCAAAAGAATACGTGGCAGATGACGAACTGATCGCCCGCGATGGTTACAACGAAACCACGTTGGAGGCTTTCGGTTGCACGTCACGCGGGCAGGCGTACCGCGCTGGCAAATGGCTGATAGAAACAGCAAAGCGCGAACCATCAAAATTCACGTTTAAAATGGCCCGTGACGCAATTCACTTCACACCAGGGGATATTATCGAGATACTCGACAATAACCGCGCTGGCGCTCGTTTGGGCGGTCGTATCGTGGCGAATAACGGGAAGGTTATAACTGTAGACAAGGTTGATTCTGACCTGGTGGCGGCTGGTGACACTATCAGCTTGCTGGATAGCGACGGCAAGTTTAAAAAACATCAGATCACTGGAGTTAACGGAAACAATATTACCCTTGCAGCCGCGCCAGCATGGATTCGCAACGGAACCGTATTTGCTGTTTCTACTGAATCCGCAAAACCTGTTCTGTGTCGAATCACCAGCGTAGCAGAAACCGAAAATAACAGCGTGTACACCATCGAGGCTGCGCAGCATGATACGCACAAACAGGCCGTAGTTGATGAAGGCGCGATCTTCGAGGTAAACAACGACACGCTTAATCACTTCCGCGTGCCGAACATTGAAAACCTGAAGGTGTTAAATGTTGGTTCTGAAACTGTTCAATGTCGCGCTACATGGGAAACACAGACGACAACGCATCGCCTGACCTTTGAGATCCGCGTATATAACGCGGAAGGCCGAGTGGTGGCAGCTTATGAAACAACGAATTACCGCTATGATTTTTATGGCCTCGATGCTGGCAGCTACACGCTTGGTATTCGCGGTCGTAATGACACTGGCATGAAGGGGGCGGAAAGTATTGTGGACCTAGTTATTGGTGCGCCAGCGGCCCCGATTGGAGTTAATTGGGTTCCCGGTGTTTTCCAGGCAACAGTGTACCCAATCAGCAAAACAACCCTGACCACTGATACGGCATATGAGTTCTACTTCTCAGGTGAAAACCAGATCACAGACCCATCAAAAGTAACCACGCTGGCGCAGTTCACCGGGCGCGGCTACCAATGGACGTTTGGCGGCATGAATACGGGCCACACATATTACGTTTATGTGCGCACACGCAATGCTTTTGGCGTGTCTGACTTTGTGGAGGCATCAGGTAAGCCTACAGAGAATTTTGATGAAATCAGTGACTACGTCACAAAAGACGTGATTAATTCAGAACAGTTTAAAGGGATGATTGGCGACATTAAAGATCTAGGCGACCGCGCAGACCTTATCGAAAGCGCTACAAATGACCTTAAAAACGCTACTGACAGCCTCAAAACTGCAACTGATAACCTGACAAACATCACTGAAGATTTGAGGACTGACACGGACGGCCTAATCACAGAAACTGGGGCCATAAAAGCTGATACGGACACACTGAAAAAAGAAACGGAAGATCTTTATAAAAAGGTTGGGGAAAACACCGATGGTATTGGACAACATGAGGTAAGAATTGACTCGCTAGAGGTATCCAGCGAAAGAATCGACAGCGAACTGGCGCAAGCAAAAGCAAGCCTGCAAAACGCATCTTTGGCGCTAATCAATAACTCGCTTGCACAGACCAACACGCGGGTTACGCTCACTGCACAGTACAAGAAAGGGAAATCAGAAACCAACGCGCAAATTGACCGCATTGACAACGTTATTGCTGAAGAGAAAAAGGCTACAGCTGAATCACTGAAAACCATCACTGCAGAAATGAACACGATGGATTCTAACCTCAAAAGTCAGATCTCCAGTGTGGAACGTGCAGTGGCTGACGAAACAAGTGCCCGCGCTGAAGCAATTAACAGCGTGAACGCATCAATAAGCAATCTCGACAAGAAAACCGACGCCAGCGTGAACCGCCTTGATCAAGCCATCGCAGACGAAACAAGCGCCCGCTCACAGGCTATCAGCGGCGTGAATGCGTCAATAAGCAATCTTGAAAGCAAAACAGACGCCAGCGTTTCACGTCTTGATAAGGCAATATCTGACGAAACGCAGGCAAGAAGCGACGCAATAACAGAGGTCAAAGCTGATTTAACAACGCTCGAAAGTAACACAAACGCCAGCGTTAAACGCTTAGACCAGGCTATTGCTGACGAATCAAGCGCCCGTGCTCAGGCTATATCTGGAATCAGCGCCGAACTTGGCAAGGTTGAAAATAACGTTGACAAGAACAGCGACGAAATAAGCCAGACCAAAGCAAGCCTGCAAAACGCCTCGATTGCGCTGATTAACAACTCAATCGCTCAAACCAACACGCGTGTTACGCTTACGGCCCAATACAAGAAAGGACGCAGCGAAACCAACGCGCAAATTGACCGCATTGACAACGTTATTGCTGAAGAGAAAAAGGCTACAGCGGAAGCAGTTAGCGTGGTGAAAGCATCGATCACGGATCTTGATAAGAAGACTGACGCGAGTGTTTCCCGTCTCGACAAGGCTATCGCTGACGAAACCAGCGCACGCAGCGAGGCGGTAAGCGACGTTAACGCAAGCGTTTCAGCGCTCGACAAGAAAACCGACGCCAGCGTTAAACGCCTGGACCAGGCAATTGCAGATGAGACAAGCGCAAGAACTGAAGCTATCAGCGGTGTGAACGCAAGCATTAACACGCTTGAAAGCAACACTGAATCTGAAGTTAACAGAATTGACCAGGCAATCGCTGACGAGGCCAGCGCCCGCGCTCAGGCCATCAGCGGCGTGAACGCATCAATTTCCACGCTTGATAGCAAGGTTACAAGCAACGTGACCCGCATCGACAAGGCCATTGCAGACGAAACGAAGGCACGCACTGACGCAATAAGTAGCCTTAATTCATCGCTTACCAGTACGATTAACTCGAAGGTGTCTGAGGTATCAACGGCGCTTTCTACACATGAAGCATCAAGCGCGGAAAAATTCGGCCAGATCTCAGCGTCTTTCGAATCCGTAAACTCAAGTATTACAGAATGGTCGCAGGCCATGACAACCGCTGACGATGCATTGTCAACCAAAATTGATCAGTTAACAGTAACCGTTAACGGGAACACAACGGCGATAGAGACAACATCGAAAGCGTTAACAGACTTCAAAGGCAATGTTGATGCGTCGTACTCTATCAAGCTGGCAACCGACAACAACGGCATGAAGTACGCGACAGGTATGTCGCTTGGCCTTACTGGTGACGGCACTAACTTTCAATCGCAGTGTATTTTCCTGGTTGACAGGTTCGCGCTAATGACTGCGGCAAACGGCACATATCAAACGCCTTTCTATATCGAAAATGGTGCAATGTATGTACGGGAAGCGTTTATTAAAAACGGTTCAATCGACAATGCAAAAATAGGCAATGTCATAACGTCCTACAACTGGAACGGCAACGATCAAGGGTGGGCGATAGTTAAAGATGGCTGGGCTGTATTTAACAACGTTACAGTACGCGGCACGGTATACGCTAATGCTGGGGTGTTTAACGGTACTGTTTACGCAAATGACGGTAAATTCTCTGGAACAGTGGAGGCAAATTCATTTATCGGTGATGTTGCAAATATGTACACAGGATCTGACGTTAGCAGGTCAAACAATGGTGTACTTCAAAAAGTAATTACATATACAGACACAACAGCAGCAGCCCACAGGAGACATATTTGCGTTATGGCAAACGTTAAAGGTAACGGTGCTTGCACAGTAAACATTAACGGATCAGAAAAGGGCTTGTCTGTAAATGATAATGAACGGCTTATCATGCACTCTGCGGCGGTATATGGACAGAACGTTACAGTAGTGATTAGCATATCCGCTCAGAATGGTAGGGGTGCGTATATATTCTCACCGACCGTTATAGTATCGCGCGGCTCTGGTTCATTCTCTGGATAA

Genome Context

Tertiary structure

PDB ID

7d24ffcf795b7387d875785c3be27c25cba2bf7ee5872a07774ad16d510a1870

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7293

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A novel group of Nus-dependent non-lambdoid bacteriophages	Negrete-Mendez,H., Valencia-Toxqui,G., Sepulveda-Robles,O., Rios-Castro,E., Hurtado-Cortes,J.C., Flores,V., Cazares,A., Fernandez-Ramirez,F., Martinez-Penafiel,E. and Kameyama,L.	2025-02-24	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature