Protein

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Genbank accession
AVR55812.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYGIDNVWSFVNDSQTGIDKVPVNKIILLKSENKLYLKKQEGGLTATSTVNEAILNNSIVSLSSDGNLGVVDSSIKVINDPEFTTTDNISKGKKMFKIAIEPDTIIQVLGLYIENTANSSIDAVPFDYIIKNNNVVIYTDNDTIPIKKIIYSKTKSSQLSLSSLPKLLTENLEWTVGTNGTFSNLADALQEASKYISVTNYKITITMKSSYRLTESLHINNANLGHVVLTSENDYVDFDGTMTPNPSFINQYAVNPIAVSFTFGISPTISFKLRFSSVPTMFSMAFGFLQTNFKLNNSGVYNAKWGVGSVGCIGLVQNSTFENCTESGVVADNGSILNVWENNTFKTCSGNILWSADSSKIYAGNVTFDGTYNNVAANCGVSHIASELGFNTPIFKNISNSNSYALFASHGGNITCNSNIVVSGFNKTNITANVFSSSGCIYLY
Physico‐chemical
properties
protein length:445 AA
molecular weight: 48302,81560 Da
isoelectric point:5,47652
aromaticity:0,10112
hydropathy:-0,01101

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVR55812.1
1 445
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,9198
Central domain 184 432 250 0,9736
C-terminal 433 445 12 0,7345
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-432
C-terminal
433-445

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CP39
[NCBI] 		2136799 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR55812.1 [NCBI]
Genbank nucleotide accession
MH107028.1 [NCBI]
CDS location
range 122892 -> 124229
strand -
CDS
ATGGCATATGGTATAGATAATGTATGGTCATTTGTAAATGATTCACAAACTGGCATAGATAAGGTTCCAGTCAATAAAATAATATTACTAAAAAGTGAAAATAAATTATATTTAAAAAAACAAGAAGGTGGATTGACAGCTACATCAACTGTAAATGAAGCAATTCTTAATAATAGTATTGTATCATTATCAAGTGATGGTAATTTAGGTGTAGTTGATAGTAGTATCAAAGTAATAAATGATCCAGAATTTACCACAACTGATAATATCAGTAAAGGTAAAAAAATGTTCAAAATAGCAATTGAACCTGATACAATAATTCAAGTTCTGGGATTATATATAGAAAATACTGCAAACTCATCAATAGATGCAGTGCCTTTTGACTACATTATTAAAAATAATAATGTAGTAATATATACTGATAATGATACAATTCCTATCAAAAAGATAATTTATTCAAAAACAAAAAGCAGTCAATTAAGTTTAAGTAGTTTACCTAAACTATTAACAGAGAATCTTGAATGGACTGTTGGTACAAATGGAACATTTTCAAATTTAGCAGATGCATTACAAGAAGCTTCAAAATATATATCTGTGACAAATTATAAAATTACTATAACAATGAAGTCATCGTATAGATTAACTGAAAGTCTTCATATCAATAATGCAAATTTAGGACATGTTGTTTTAACATCAGAAAATGATTATGTTGATTTTGATGGAACTATGACACCTAATCCATCATTTATAAATCAATACGCAGTAAATCCTATTGCAGTTTCATTTACATTTGGAATATCTCCAACAATATCGTTTAAACTTAGATTTAGTTCAGTACCTACTATGTTTTCGATGGCATTTGGATTCTTACAAACTAATTTTAAGCTTAATAATTCTGGTGTATATAATGCAAAATGGGGTGTTGGTAGTGTTGGATGTATAGGATTAGTACAAAACAGTACATTTGAAAATTGTACTGAATCGGGTGTAGTAGCAGACAATGGTAGTATATTAAATGTGTGGGAAAATAATACATTTAAAACTTGCAGTGGAAATATACTATGGAGTGCCGATTCAAGTAAAATATATGCTGGAAATGTTACATTTGATGGAACATATAATAATGTAGCTGCTAATTGTGGTGTTTCGCATATAGCATCTGAATTAGGATTTAATACCCCTATATTTAAAAATATTTCAAACAGTAATTCATATGCTTTATTTGCTTCTCATGGTGGGAATATTACATGTAATAGTAATATAGTTGTATCTGGTTTCAATAAAACTAATATTACTGCAAATGTTTTTTCATCTAGTGGTTGTATATACTTATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a6a5c7652007af3160c7d22b989ebe463b3537bb26730c40b71a24b2e400b959
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification, CP39 whole genome analysis and application of Campylobacter jejuni 11168 phage Song,Z., Huang,J., Tong,Y. and Zhao,F. 2022-02-26 — GenBank