Protein

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Genbank accession
BDR25744.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MSNLNDFFGSSGSEGGGAEVKRLDDLVDVSVASPTNGQTLVFDNTGWVNRKLSYNDLSNLPSISNTLSGLDDVDTAGTIAGYVLQFNGTKWVGMPASSSISLDDLSNVAITTPSINQTLLFNGSTWYNGSVDFNNLINTPVIPTHLGDLSDVSVSASTQEGSVLVFRTGQWIGSVINYNDLSNTPTIPQNDSFTFLGLSDTNDIPEANGFLKWNNLSTEIEYVTSIPSSAITGLANVATTGLLSNLVDVNVSGVSNGQVLTYNSSSSTWVPTTPSTGGGTSDPTAIFSTDGNTYINTEELVDELVLKTGPGSGNVNVILGGSGKIVVEGQSPEIISETSLKLTGSNLYLNELSWPTTDGTSGQVLATDGNGNLSFITVSSGGTTILITWRGEWEETSYNINDAVSYAGSSYICVAEVAGGDISIPPSSTNLNWNILALKGEDGSFFTYKGTYDSNTEYVDKDVVYYNGSSYVVLDGQGPITGITPTDQSKWGILALAGSGGTGSGFTYKNEYNNSETYQDQDVVSYGGSSYIVSPGNGPVTGILPTDSSIWGIIALKGQDGSGTGNQSLEDLTDVSSATPTSGNVLVANGSSWSSSKLSYSQLQGLPTLSVVATSGSYNDLLDKPSNIGTFIGLSDTDTPSLPNGFLKWNAQGTSISYVQSIPSESISGLATVATTGDYSDLTNTPNIPVMLDDLTDVNLVTPPVTGQALVYNGTYWLAGNAGSGSSTLASLTDVNLTTPTNNQVLSYDNTQNLWINTQIDYDDILNTPSIPVNNSFSLVGLNDTDNSAIPNAFLKWNSTGNSVEYVQSISASSITGLSTVATTGDYNDLTNLPSIPENISDLNDVDTSTAPTDGQVLIYSAALGKWIPGDQSGTSPSPGGFPGEWLKINYTPGNLIGTIECSPNISYTIVDNVANNNLTLDLVFANRPYPPAGWMWYGYLVTQGRYVLKMQDTTSHPHTLELTTTENPFGTGTGKLSGFQCRVSTTGAQSYGPLQPTHAYVIFGW
Physico‐chemical
properties
protein length:1006 AA
molecular weight: 105858,61440 Da
isoelectric point:4,05003
aromaticity:0,08648
hydropathy:-0,15815

Domains

Domains [InterPro]
DC_0755
ATT
2–99
DC_0755 DC_1797 DC_1461
DC_0755
ATT
93–158
DC_0755 G3DSA:2.10.10.90 DC_0755
DC_0165
STR
414–719
DC_0165
BDR25744.1
1 1006
Architecture
ATT
STR
ATT
ATT 2-158 | STR 166-756 | ATT 757-1006
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BDR25744.1
1 1006
Domain Start End Length (AA) Confidence
N-terminal 1 875 875 0,9974
Central domain 876 995 121 0,0415
C-terminal 996 1006 10 0,9836
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-875
Central
876-995
C-terminal
996-1006

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-2
[NCBI] 		2972142 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR25744.1 [NCBI]
Genbank nucleotide accession
LC727697 [NCBI]
CDS location
range 108921 -> 111941
strand -
CDS
ATGTCTAATTTAAATGATTTTTTTGGATCAAGTGGATCAGAAGGCGGGGGAGCCGAAGTTAAAAGACTAGACGACTTAGTAGACGTTTCTGTAGCTAGTCCAACTAACGGTCAAACCCTTGTTTTTGACAACACAGGCTGGGTAAACAGAAAACTTAGCTACAATGATTTATCTAATCTTCCGTCTATATCAAACACATTAAGTGGATTAGATGATGTAGACACTGCCGGTACTATAGCCGGATATGTACTACAATTTAACGGAACAAAATGGGTGGGTATGCCTGCCAGTAGTTCTATTTCGTTAGACGATTTATCTAATGTTGCTATTACAACACCCTCAATAAACCAAACACTGCTATTTAATGGATCAACCTGGTATAACGGATCTGTAGATTTTAATAATTTAATAAACACACCCGTTATTCCTACACATTTAGGTGATTTGTCAGATGTTTCTGTCAGTGCTTCTACTCAAGAAGGAAGTGTACTAGTTTTTAGAACAGGACAATGGATCGGTTCTGTAATAAATTACAACGATTTGTCAAATACTCCTACTATACCGCAAAACGATTCATTTACATTCTTAGGTTTATCCGATACTAACGATATACCGGAAGCAAATGGGTTTTTAAAATGGAACAATTTAAGTACAGAAATAGAATATGTTACTTCAATACCTTCGTCTGCTATAACAGGATTAGCCAATGTTGCAACAACTGGCTTATTATCCAATTTAGTAGATGTGAATGTCAGTGGTGTATCTAATGGCCAGGTTCTAACATATAATTCCTCTTCTAGCACATGGGTTCCTACTACGCCATCGACTGGCGGCGGAACAAGTGATCCTACTGCTATTTTTAGTACAGACGGTAATACGTATATTAATACTGAAGAATTAGTAGACGAGCTAGTTTTAAAAACCGGACCTGGATCCGGAAATGTAAATGTCATTCTCGGTGGCAGCGGTAAGATTGTCGTCGAAGGTCAATCTCCGGAAATAATATCGGAAACTAGTTTAAAATTAACAGGTAGCAATTTATATTTAAATGAACTATCTTGGCCTACAACTGACGGAACGAGCGGTCAAGTTTTAGCTACAGACGGAAATGGAAATCTCTCATTTATAACAGTATCGTCCGGTGGAACTACTATACTCATAACCTGGCGCGGCGAATGGGAAGAAACTAGTTATAATATAAACGACGCAGTAAGTTATGCTGGTTCTAGTTATATATGTGTTGCTGAAGTAGCTGGCGGCGATATTTCTATTCCGCCTAGCAGTACAAACTTAAATTGGAATATACTAGCACTAAAAGGTGAAGACGGATCATTCTTTACTTATAAGGGAACTTATGATTCTAATACCGAATATGTAGATAAAGATGTAGTTTATTATAACGGTTCATCTTATGTAGTGTTAGACGGGCAAGGACCTATTACAGGAATCACCCCTACTGACCAATCTAAATGGGGTATATTAGCGTTAGCTGGCTCTGGAGGAACAGGCAGTGGTTTTACTTACAAAAATGAATATAATAATTCGGAAACTTATCAAGACCAAGACGTTGTTAGTTATGGAGGATCTTCATACATTGTTAGTCCTGGCAACGGTCCTGTTACTGGTATTTTGCCTACCGATTCTTCTATTTGGGGTATTATTGCACTCAAGGGTCAAGACGGGTCTGGAACAGGTAACCAGTCGCTTGAAGATTTAACTGATGTATCTAGTGCCACTCCTACTTCGGGGAATGTGTTAGTAGCTAACGGGTCATCATGGTCTTCTTCTAAGTTATCATATAGTCAACTCCAAGGTCTACCCACTTTATCTGTAGTTGCTACTTCTGGTAGTTATAATGACTTATTAGATAAACCTTCTAATATAGGAACATTTATTGGATTATCAGATACTGATACTCCTTCCCTACCAAATGGATTTTTAAAATGGAATGCACAAGGAACATCTATATCTTATGTACAATCAATACCTTCAGAATCTATTTCTGGTTTGGCTACTGTTGCTACTACCGGTGATTATAGCGATTTAACTAATACACCTAACATACCAGTTATGTTAGACGACTTAACCGATGTGAATTTAGTTACACCTCCTGTAACAGGTCAGGCTTTAGTATACAACGGTACGTATTGGTTGGCAGGCAATGCTGGAAGCGGTTCGAGCACACTAGCATCATTAACTGACGTTAACTTAACTACTCCTACTAACAATCAAGTATTATCGTATGACAATACACAAAATTTGTGGATTAATACACAAATCGATTATGATGATATTTTAAATACACCTAGTATACCCGTAAATAATAGCTTTAGCTTGGTTGGGTTGAACGACACGGATAATTCTGCTATTCCGAACGCATTCTTAAAATGGAACTCAACCGGGAATTCAGTAGAATATGTTCAGTCTATTTCTGCTAGTAGTATAACAGGATTATCTACTGTTGCTACAACTGGAGACTACAACGACTTAACTAATTTACCTTCTATTCCAGAAAATATAAGTGATTTAAATGATGTAGATACATCTACTGCACCTACTGACGGTCAAGTACTCATATATAGTGCAGCACTAGGAAAGTGGATTCCTGGAGATCAAAGCGGTACTAGTCCGTCTCCGGGCGGCTTCCCCGGCGAATGGTTAAAAATCAATTATACCCCTGGTAATTTAATAGGTACAATTGAGTGTTCGCCTAACATATCATACACTATAGTAGATAATGTTGCAAATAATAATCTTACTTTAGATTTAGTATTTGCAAATAGACCATACCCGCCTGCTGGGTGGATGTGGTATGGTTACTTAGTAACACAAGGCAGATATGTATTAAAAATGCAAGATACTACTAGTCATCCGCATACGTTAGAGCTTACAACTACTGAAAATCCATTTGGGACAGGAACTGGAAAATTATCAGGATTCCAGTGCAGGGTATCAACTACTGGAGCCCAAAGTTATGGTCCTCTTCAGCCTACGCATGCATATGTGATATTTGGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49867b72f1e9308b49b91c9b597c19072601cf78415ad5be8ebb147023f8b65e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-2 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank