Protein

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Genbank accession
XRA40300.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLNNLNQPKGSTIGVLRDGRTVQETFDSLMYTEVSLKAGKENAELNRASLQAAADSTKLLAVPAGEYYISSHVTLRTGNVIVGRGANAFSSGYTRLVCETPGEGVFWYTGDTSTGQKRMPQVYNMGLKGDYPIRFNDERTAIIADQGASNVPYGMVPVVQFCTIDPLTNGVGIGISASKMFDGAFSFNEIANFETGVLLNGCDLMFVAHNRIRNAHKYMVLELGVGTFGSQNEIYHNDILHAGSPNCIFIKSTARHVRIYDNYLEQASGTAGQALIGFIDVSEVDAPSFNGNAPAVRASTIIKDNRIDGQYFAKYFVYKYQPSSQTYGVIEDVSTVGPNTGLGANHLVLVDASGNTVDRVPFLYNSVQTCSFRFSGPRFGKWNGYSSVSDFSLKMAGLNMSMWGTSLGGNSFKDYLYARGNSLILTNGFTAAAVLQFPVGTLVRPSSQYAIKVTAKCSSGSETLTFAGVANGVGQTSVSMQLSTEPTSATTQFTSGTTQSGFSLGRSNNGSDIEILAIEFIKLYSLEYSVVADTGATTVYRGSGDVVISASGNLQFPAYVVLRYIGGSLKEVYKSVTDAAVIDIAWSVSGQTLTVNITGSGGGKRFSVTQEEV
Physico‐chemical
properties
protein length:613 AA
molecular weight: 65610,90820 Da
isoelectric point:6,03848
aromaticity:0,10114
hydropathy:-0,04258

Domains

Domains [InterPro]
DC_1231
ATT
1–148
DC_1231 DC_0556
IPR012334
STR
37–391
IPR012334
IPR011050
STR
47–356
IPR011050
XRA40300.1
1 613
Architecture
ATT
STR
RBD
ATT 1-148 | STR 149-391 | RBD 392-613
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA40300.1
1 613
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,9558
Central domain 43 382 341 0,9868
C-terminal 383 613 230 0,9892
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-382
C-terminal
383-613

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage P12
[NCBI] 		3410959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA40300.1 [NCBI]
Genbank nucleotide accession
PV173013.1 [NCBI]
CDS location
range 3527 -> 5368
strand -
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACCGTCCAAGAGACATTTGACTCATTGATGTACACAGAGGTCTCACTGAAGGCTGGTAAGGAGAACGCCGAGTTGAACAGGGCTTCCCTTCAGGCCGCAGCGGATTCCACTAAGTTACTGGCGGTACCAGCTGGTGAATACTACATATCGTCCCACGTGACCCTTCGCACTGGGAACGTTATAGTAGGACGAGGGGCCAACGCATTCTCTTCTGGGTACACTAGGTTAGTTTGCGAGACTCCTGGTGAGGGTGTATTCTGGTACACAGGCGACACATCAACAGGCCAGAAGCGGATGCCGCAGGTGTACAACATGGGCCTGAAGGGTGACTATCCTATTAGGTTCAACGATGAGAGAACGGCAATTATAGCAGACCAAGGGGCTTCAAACGTCCCTTATGGCATGGTTCCTGTCGTTCAGTTCTGCACAATCGACCCGCTAACCAATGGCGTAGGGATTGGTATCTCAGCGTCCAAAATGTTTGATGGTGCGTTCTCGTTCAACGAAATTGCCAACTTCGAAACAGGTGTTCTCCTCAACGGGTGTGACCTTATGTTCGTTGCTCATAACCGCATCCGTAACGCCCATAAGTACATGGTGTTGGAGCTTGGTGTTGGGACATTCGGTTCACAGAACGAGATTTACCACAACGACATTCTGCACGCTGGCTCACCGAACTGTATCTTCATCAAGTCGACGGCTCGACATGTTCGCATCTACGACAACTATCTCGAGCAGGCATCCGGAACAGCAGGGCAGGCTCTTATTGGGTTCATTGATGTCTCAGAGGTTGACGCGCCGTCATTCAATGGAAATGCACCAGCCGTCAGGGCCTCTACCATCATAAAGGACAACCGCATAGACGGACAGTATTTCGCTAAGTACTTCGTGTACAAGTACCAGCCGTCTAGTCAGACATACGGTGTCATTGAGGACGTGTCGACGGTAGGTCCAAACACTGGCTTGGGAGCAAACCACTTGGTTCTTGTCGACGCTTCCGGTAATACCGTAGATAGGGTGCCGTTCCTGTACAACTCAGTACAGACGTGCTCATTCCGCTTTTCAGGCCCACGCTTCGGTAAGTGGAACGGGTATAGTTCTGTGAGTGACTTTTCACTTAAAATGGCTGGCCTGAACATGTCAATGTGGGGCACGTCGTTAGGCGGTAACAGCTTCAAGGACTACCTGTACGCAAGAGGAAACTCGCTCATTTTGACAAACGGATTCACCGCAGCTGCTGTTCTACAGTTCCCAGTGGGTACATTGGTGCGCCCATCCTCTCAGTATGCCATCAAGGTCACCGCGAAGTGTTCGTCGGGAAGCGAGACATTGACATTTGCTGGTGTAGCTAACGGTGTAGGACAGACAAGCGTCTCTATGCAGCTGAGCACAGAGCCAACTAGCGCCACGACACAGTTCACCTCGGGTACCACTCAGAGCGGTTTCTCCTTGGGCCGCTCCAACAACGGGTCGGACATTGAGATACTGGCTATTGAGTTTATCAAGTTGTACTCTCTGGAATACTCGGTAGTGGCCGACACAGGCGCTACCACGGTGTACCGAGGGTCTGGAGACGTGGTCATTTCGGCCTCTGGGAACCTACAATTCCCGGCGTATGTTGTTCTTCGGTACATTGGCGGAAGCCTCAAGGAAGTGTATAAGAGCGTCACTGATGCTGCCGTGATTGACATTGCGTGGTCCGTATCTGGCCAGACCCTTACCGTGAACATTACGGGGAGTGGTGGCGGTAAGCGGTTCTCCGTCACACAGGAGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
775abb8d4d6278f997bac444119b088d8f3eb5eb0617368b5d8f5b89c033d080
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6639
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50