Protein

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Genbank accession
YP_009854053.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSTSDLSEVVQQIQELLNEKLKPSANTLERFIKLSEVIDLENGFFLRSLSKFESDNQNLVNQLLDSLGLASVDGETIVSRSVITNLGNSRLNSATAINKITIKKIFVGDGNGSSYIITGAETSLKNVKFQGLSSNPISDTNRPNILYFDISIPATIGGFTIREVGILDDFDQLFALGVTSVVTLPDPTQNNGNVKHIRVSIELPTLNDVTKFNFQNPAFPHNTLGSRDVENAHPLSSISGGKELRDEIYQGVIYPQKPELVADITGQNEIPVGTTMVRLAVGTTGQTAVYAMQPPVSGQITSIKRFANEPFAIIAGGVEAALFNPLSKTSPDLKSISAMKNVNKSLINVLNYFSNSDRIPQIKPYLWVPTESTSAHDGVTAVSRAALQSWNGLASGLSSMLGWSGTGNGVFYNVNAFANAKKVSDFISDGNDQAACNYGWRALSKVVKDGDIILVDGTYLAGNGGSELRIANKTGVNIIGGIIKKVSGSAEYPIWIDTCVDTTLSGVFLKGKDTVLPVWGSQGLYLRNSVRTIVNGCHFTDAGDAAIRFARSTTSAAEVASFGVLIVNCTFKNCNQITSNNTGASDVIFANNYIDGHSTFKITQRTEIVPAATLVFGNIYRNADKVTEIQGGRGVYVFGNVGTTKQLAGVYPNTYTFFDGYPISTDVYFYDNNLEFTHPGNFILYSEVRANLDGGPIIQDGDFVIKGNVFKTKTPRTAFTLRFVHYTEEKSQLFQNLIIEDNEFIGSFRDLVTVGGDTSFDLSHGELVSVCNNRGGTFTQDWVTIKTKVYNTGQRPNVYVSGNKRMTVYKPLEIGYAYREVPNGNQTIPNEFFYDDNDLTITYGGTLFYDGSKYSPGIKTSISGNKFHSTATANVSQLWLFTPEPNVAARSIFMYRNNTQVIDPASNARPLYVNGEGTGPATRWGMLVAANNHFTKGLRGPLCDNSAYRKSGVQFGLTTGESKSVKLIYEVGESNLNGVAGTWRYTRIWSDGTCRIHGAWLNAGSNSFNLYFGRSFETLLDLQITNLGNVGAPYVYSRFANYAVVRFNGGGNTWFSFTAEGKLSASQIDQIVMDNNVY
Physico‐chemical
properties
protein length:1079 AA
molecular weight: 117593,58610 Da
isoelectric point:6,24907
aromaticity:0,10380
hydropathy:-0,16358

Domains

Domains [InterPro]
DC_1371
STR
71–487
DC_1371
IPR022225
ATT
82–211
IPR022225 IPR011050
IPR039448
ENZ
456–599
IPR039448
YP_009854053.1
1 1079
Architecture
STR
ATT
STR
STR 71-81 | ATT 82-211 | STR 212-676 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009854053.1
1 1079
Domain Start End Length (AA) Confidence
N-terminal 1 434 434 0,9894
Central domain 435 948 515 0,9896
C-terminal 949 1079 130 0,9643
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-434
Central
435-948
C-terminal
949-1079

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VchM_Kuja
[NCBI] 		2686437 Uroviricota > Caudoviricetes > Pantevenvirales > Kujavirus > Kujavirus kuja
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009854053.1 [NCBI]
Genbank nucleotide accession
NC_048827.1 [NCBI]
CDS location
range 4 -> 3243
strand -
CDS
ATGTCTAGTACATCAGATCTTTCAGAGGTAGTTCAACAGATACAAGAACTGTTGAACGAAAAACTAAAACCATCAGCAAACACTTTAGAAAGATTTATAAAACTTTCTGAAGTTATAGATCTTGAAAACGGTTTCTTTTTGAGATCACTATCAAAATTTGAGTCTGATAACCAAAATCTTGTAAACCAGTTACTGGATTCATTAGGTCTTGCATCTGTTGATGGTGAAACAATTGTATCTAGAAGTGTAATTACAAATCTTGGTAATTCACGATTGAATTCAGCCACTGCAATCAATAAAATAACAATAAAGAAAATTTTTGTTGGTGATGGTAATGGGTCATCATACATTATAACGGGTGCTGAAACATCCTTAAAGAATGTTAAATTTCAAGGATTAAGTTCAAATCCAATATCAGACACAAACAGACCAAACATTTTATATTTTGATATTTCAATACCTGCAACAATAGGTGGATTTACTATACGTGAGGTAGGTATTTTAGACGATTTTGATCAGTTGTTTGCATTGGGTGTAACCTCAGTTGTGACATTACCCGATCCAACACAAAATAATGGTAATGTTAAACATATTAGAGTAAGTATTGAATTACCTACATTAAATGATGTTACAAAATTCAATTTTCAAAACCCTGCATTTCCCCATAATACATTAGGTTCTAGGGATGTAGAAAATGCACACCCATTAAGCTCAATTTCTGGTGGTAAAGAACTAAGAGATGAAATTTATCAAGGTGTTATTTACCCACAAAAACCTGAATTAGTTGCTGATATTACTGGTCAGAATGAAATTCCAGTTGGAACCACAATGGTTCGTCTTGCAGTCGGCACCACAGGACAAACCGCTGTTTATGCTATGCAACCACCAGTGAGTGGTCAGATAACGTCTATTAAACGATTTGCTAACGAACCATTTGCTATTATTGCAGGTGGTGTTGAGGCTGCATTGTTTAATCCTTTATCAAAAACGTCACCAGATTTAAAAAGTATTTCAGCAATGAAGAACGTAAATAAATCATTGATTAACGTTCTAAACTATTTTTCAAACTCTGATAGAATACCTCAAATAAAACCATATTTATGGGTACCAACAGAAAGTACAAGTGCTCATGATGGTGTGACTGCTGTTTCAAGAGCTGCATTGCAATCATGGAATGGTTTAGCGTCAGGCTTGTCAAGTATGCTTGGTTGGTCAGGTACTGGTAATGGTGTTTTTTATAACGTTAATGCGTTTGCCAATGCTAAGAAGGTTAGTGATTTTATATCTGATGGTAATGATCAAGCCGCTTGTAACTACGGTTGGAGAGCGCTCTCTAAAGTTGTAAAAGACGGTGATATTATTCTGGTTGATGGTACGTACTTGGCAGGTAATGGTGGATCCGAGCTTCGTATAGCTAACAAAACAGGCGTTAATATAATTGGTGGAATAATTAAGAAAGTTTCTGGTTCTGCTGAGTACCCTATTTGGATAGACACTTGTGTTGATACCACTCTGTCAGGTGTATTCTTGAAAGGTAAGGATACGGTTCTTCCAGTATGGGGTTCTCAAGGTTTATATCTGCGTAACAGTGTGCGCACAATTGTGAACGGTTGCCATTTCACTGACGCTGGTGACGCGGCTATAAGATTTGCAAGGTCTACTACTTCTGCCGCTGAAGTCGCATCATTCGGTGTATTGATTGTTAACTGCACCTTCAAAAACTGTAACCAAATCACAAGTAATAACACGGGTGCTTCTGACGTTATATTTGCCAATAACTATATTGACGGTCACTCAACTTTCAAAATCACACAGAGGACAGAAATTGTTCCTGCTGCGACACTAGTGTTCGGAAACATCTATCGTAATGCTGATAAGGTGACTGAGATACAAGGCGGTAGAGGAGTTTATGTGTTTGGTAACGTAGGAACAACCAAACAGCTCGCAGGTGTTTACCCTAACACATACACCTTCTTTGACGGGTATCCTATTTCAACAGACGTGTACTTCTACGACAACAACTTAGAATTTACACACCCTGGCAACTTTATCCTTTATTCTGAGGTTCGCGCAAACTTGGATGGTGGACCAATTATTCAGGATGGTGATTTTGTTATCAAGGGTAACGTCTTCAAAACCAAAACACCTAGAACAGCCTTTACACTAAGATTTGTTCATTACACTGAAGAGAAATCACAGTTGTTCCAAAATTTGATAATTGAGGATAATGAGTTTATTGGTAGTTTCAGGGACTTGGTTACTGTGGGTGGTGACACTTCATTTGACCTTTCCCACGGTGAATTAGTAAGTGTATGTAATAACAGGGGTGGAACATTTACTCAAGATTGGGTGACTATTAAAACTAAAGTGTACAACACTGGTCAAAGACCAAACGTCTATGTATCTGGTAACAAACGCATGACCGTTTACAAACCACTAGAGATAGGCTATGCGTATCGTGAGGTTCCAAATGGAAATCAAACCATACCAAATGAGTTTTTCTATGATGACAATGATCTAACCATAACTTATGGTGGCACCTTGTTCTATGACGGCTCAAAATACTCACCTGGGATTAAGACTTCAATTTCTGGCAATAAGTTCCATTCGACCGCGACCGCGAATGTTAGTCAACTTTGGTTGTTCACACCGGAACCAAACGTTGCCGCTAGGTCTATATTCATGTACAGGAACAACACACAAGTTATAGATCCCGCGAGTAATGCTAGACCTTTATATGTTAACGGTGAAGGAACGGGTCCGGCGACTCGATGGGGAATGTTGGTCGCAGCAAACAACCATTTTACAAAAGGTTTACGCGGACCACTTTGTGATAACTCGGCTTATAGGAAATCTGGTGTTCAATTCGGACTCACTACGGGTGAATCAAAATCAGTTAAATTAATTTATGAAGTTGGTGAGTCAAATTTAAATGGTGTGGCGGGTACTTGGCGTTATACTAGAATATGGTCAGATGGTACATGTAGAATCCATGGTGCTTGGTTAAATGCTGGTTCAAACAGTTTCAATTTATACTTCGGTAGGTCGTTTGAGACGTTGCTTGATCTTCAGATAACGAACCTTGGGAATGTTGGGGCTCCTTATGTATATTCTAGATTCGCCAACTACGCCGTCGTGAGATTCAATGGTGGTGGTAACACATGGTTCAGCTTTACCGCAGAAGGTAAGTTGAGTGCTAGCCAGATAGATCAGATCGTAATGGACAACAATGTCTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
00775db21ccb94c941f7e45e7668958bad9dec73cf3e0923dd3b7655c4c88521
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5926
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel member of the family Ackermannviridae Maina,A.N., Mwaura,F.B. and Jumba,M. 2002-12 — GenBank