Protein

View in Explore
Genbank accession
QIG67946.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPVPSTPIQTASTSSDAGSLAVIVNDIIERLAATVALTNSNESGVGDLDELDTAVKTSVVAAINDLVSKFDSGELVSTYIGQLSNLNTNSKSTVVSAINEVNNKVGDITALETENTGNVVEAVNEVFAAIQALGDIDSGAIFDQLALRLVKTGDTMTGALNVLTGVQNADAPMIGIGWTGLQPSWKFMVDSAESYSMFAFDKTTGLVQGRRMTLDKTGNLTASGTVRAGSGSGILAADGNVVGNAWNAVGGLTDAVASINAKFSNYYLSTGGTLTGKIIESIGTTGAAVTFRDLKIGNAANRSWEEMIDASEAWILRSHNKSNDAILQTAMKLSLNGDVTFAGTMASGDITVGGAAQYKSDGTIIGSAWNTFGASTNAISAIQNYVSNRLAAAITIPNGGTTGQALVKASNTDGDYTWGGPYALLVHTHAIADVTGLQPALDAKATIASPTFTGDPKAPTAALGDNDTSIATTAFVQAAIGSMGKRSLTVSTSAPTSGVGVDGDVWFQV
Physico‐chemical
properties
protein length:509 AA
molecular weight: 52043,39580 Da
isoelectric point:4,46762
aromaticity:0,05697
hydropathy:0,09784

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y68
[NCBI] 		2509787 Uroviricota > Caudoviricetes > Pootjesviridae > Trinifflemingvirus > Trinifflemingvirus Y68
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67946.1 [NCBI]
Genbank nucleotide accession
MN988486 [NCBI]
CDS location
range 6214 -> 7743
strand -
CDS
ATGCCTGTACCTTCGACACCAATTCAAACTGCTTCTACTAGTTCTGATGCTGGTTCACTCGCAGTCATCGTCAACGATATCATCGAGCGTCTCGCTGCTACCGTCGCACTCACGAATTCGAACGAGAGTGGAGTCGGAGATCTCGACGAACTAGACACCGCTGTCAAAACGAGTGTCGTAGCTGCTATCAACGATCTTGTCAGTAAGTTCGACTCTGGTGAACTCGTTTCGACTTACATCGGTCAGCTTTCGAATTTGAATACGAATTCGAAGTCTACCGTTGTTTCGGCGATCAACGAAGTCAACAACAAAGTTGGCGACATCACCGCTCTCGAAACAGAGAACACCGGGAACGTCGTCGAGGCTGTGAACGAAGTCTTCGCTGCTATTCAGGCACTCGGTGACATCGACAGTGGTGCTATCTTCGATCAGCTCGCTCTCCGTCTGGTGAAGACCGGCGATACGATGACAGGTGCTCTGAATGTCCTCACAGGTGTTCAGAACGCTGACGCTCCTATGATCGGCATCGGCTGGACTGGTCTCCAGCCTTCCTGGAAGTTCATGGTGGACTCTGCTGAGTCGTATTCCATGTTCGCTTTCGATAAGACGACAGGTCTTGTTCAAGGTCGTCGAATGACTCTCGACAAGACAGGTAATCTCACTGCTTCTGGAACTGTGCGTGCTGGTAGCGGTAGTGGTATTCTTGCTGCTGACGGTAATGTTGTCGGTAATGCATGGAATGCTGTCGGAGGTCTCACAGACGCAGTTGCTTCGATCAATGCGAAGTTTTCGAACTATTATCTCTCGACTGGCGGTACACTGACAGGCAAGATCATCGAGAGCATCGGTACGACTGGTGCTGCAGTGACGTTCCGTGATCTGAAGATCGGAAATGCTGCGAACCGTAGCTGGGAAGAGATGATCGATGCTTCCGAAGCTTGGATCCTTCGCTCTCACAACAAGTCTAACGATGCGATTCTTCAGACTGCGATGAAGCTATCTCTGAACGGTGACGTGACGTTTGCTGGAACTATGGCTTCCGGCGATATTACCGTCGGAGGCGCTGCTCAGTATAAGTCTGACGGTACTATCATCGGTTCTGCGTGGAATACGTTCGGTGCTTCTACGAACGCTATCTCAGCAATTCAGAACTACGTCTCGAACAGACTTGCTGCAGCAATCACGATTCCGAACGGCGGTACGACTGGACAGGCACTCGTCAAGGCTTCTAACACCGACGGTGACTACACATGGGGTGGACCGTACGCACTTCTAGTCCACACTCATGCTATCGCTGATGTGACAGGTCTACAGCCTGCGCTTGATGCAAAGGCTACGATCGCGAGTCCTACTTTCACTGGTGATCCTAAGGCTCCTACTGCCGCTCTCGGAGATAACGATACATCTATCGCAACAACAGCATTCGTACAGGCTGCAATCGGCAGCATGGGTAAGAGAAGCCTAACCGTCTCTACTTCTGCACCTACTTCTGGTGTTGGTGTAGACGGCGACGTCTGGTTCCAGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f95d7501acc540d191d032b6d240fb800f71e16fc9115fcb1547b628f3bd5727
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank