Protein

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Genbank accession

YP_009845417.1 [GenBank]

Protein name

minor tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MASWDHRAGTSNGAYQLYLYVTEMSFDNTDRGITYLNWELGIIKVGSSGGFASTSNNTAWSVSMHGSGGNNGDQNSTGGFSFAAGDAIGTRRVIATGANWSFIHNADYSGQLSINTFAAVQTNISLGNAQIGWGNVAFTTFYRDSPAPPAPTLVSRDSDTQLTIKGYNSYDWGLGGVAPAHVLAQSDVSNMSANRVDTVYPTTGGGQGHNVVRSGLTPHKTYYFTSNTRARTGNYAGSGVLTVHARPSKPSPPEVSSKTSTSLNLTTAAPSYVGGGLTQRETQLSLDGTFATVLQTSTHLTAPVFNDLTRVQPYKLRTRVHNGVNWSDWSDVATINTPGTPPTAPTGYTVYDIASTSAKVSLGSIADNGGAVPTQARVKVSTTQSDAGLIKTVTTPSWSPTRITGLTENTQYYVSEAAYNAVENGGWGPYGAWVPLKTTNLVPNGPVLSLDSASGSFVTLEWVAPTDLNGATIANYKLRVGSNEALTANVQEFTVPADTFSQVVTGLTPASNYWAEVWTETDKGRGSGSALFAFSTTGGGGSTSGLWLNIAGVNTFCEVWYSGADGVPKLCEVWHSGADGTPKLCGA

Physico‐chemical properties

protein length:	587 AA
molecular weight:	61637,06560 Da
isoelectric point:	5,92759
aromaticity:	0,09710
hydropathy:	-0,23765

Domains

Domains [InterPro]

DC_1246
ATT
1–145

DC_1246 IPR036116 IPR003961 IPR013783

IPR013783
STR
241–337

IPR013783 IPR013783 IPR003961

IPR003961
STR
247–335

IPR003961 IPR036116

IPR003961
STR
247–327

IPR003961 IPR036116 DC_1275

IPR003961
STR
249–340

IPR003961 IPR003961 IPR003961

IPR003961
STR
349–438

IPR003961

YP_009845417.1

1 587

Architecture

ATT

STR

RBD

ATT 1-145 | STR 146-539 | RBD 540-587

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1246	ATT	DC_1246	1	145	Novel HMM	DC_1246	N-terminal	Low	Positional only	6 proteins / 6 hits
IPR036116	STR	IPR036116	146	342	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR013783	STR	IPR013783	241	337	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	247	335	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	247	327	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	249	340	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	338	441	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036116	STR	IPR036116	340	537	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR036116	STR	IPR036116	340	535	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR003961	STR	DC_0003	341	441	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	342	425	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	349	438	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	442	538	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	442	539	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	443	526	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
DC_1275	RBD	DC_1275	535	587	Novel HMM	DC_1275	C-terminal	Low	Positional only	6 proteins / 6 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_009845417.1

1 587

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	147	147	0,0005
Central domain	148	360	214	0,5307
C-terminal	361	587	226	0,5020

Note: Constraints were applied during segmentation.
Fixed 151 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-147

Central
148-360

C-terminal
361-587

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Microbacterium phage Akoni [NCBI]	2565510	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

YP_009845417.1 [NCBI]

Genbank nucleotide accession

NC_048761 [NCBI]

CDS location

range 36388 -> 38151
strand +

CDS

ATGGCCTCCTGGGATCATAGAGCGGGAACCAGCAATGGTGCCTATCAGCTCTATCTGTATGTTACTGAGATGTCGTTCGATAACACCGACCGAGGTATCACATACCTCAACTGGGAACTAGGCATCATCAAGGTCGGCTCGTCCGGTGGCTTCGCCTCGACCTCGAACAACACTGCTTGGTCTGTCAGCATGCACGGCAGTGGTGGAAACAACGGCGACCAGAACAGCACCGGCGGTTTCTCCTTCGCTGCCGGTGACGCTATTGGTACGCGACGAGTCATTGCTACAGGAGCAAACTGGTCGTTCATACACAACGCTGATTACAGTGGTCAGCTGAGCATCAACACCTTTGCTGCTGTTCAGACGAACATCAGTCTCGGTAACGCTCAGATCGGTTGGGGTAACGTTGCGTTCACGACGTTCTACCGTGATTCTCCTGCTCCTCCTGCTCCGACTCTCGTCTCTCGTGACAGCGACACTCAGCTGACCATCAAGGGCTACAACAGCTACGACTGGGGCCTTGGTGGTGTGGCTCCTGCCCACGTCCTCGCTCAATCCGACGTGAGCAACATGTCGGCTAACCGCGTGGATACGGTGTACCCGACGACCGGTGGCGGGCAGGGACACAACGTCGTCCGTAGCGGTCTGACGCCTCACAAGACCTACTACTTCACGAGCAACACCCGTGCCCGCACCGGCAACTACGCTGGCTCCGGCGTCCTGACTGTTCATGCTCGACCCAGCAAGCCGTCGCCGCCTGAGGTCTCCTCGAAGACTTCGACATCTCTCAACCTGACGACCGCCGCTCCGTCCTACGTCGGTGGTGGTCTTACCCAGCGAGAGACCCAGCTCAGCCTCGACGGCACGTTCGCAACCGTCCTGCAGACCAGCACCCATCTGACCGCTCCCGTCTTCAACGACCTGACACGCGTGCAGCCATACAAGCTCCGTACGCGAGTACACAACGGCGTCAACTGGAGTGACTGGAGTGACGTCGCGACGATCAACACTCCTGGTACTCCGCCTACGGCTCCGACCGGCTACACGGTCTATGACATCGCCTCGACCTCTGCCAAGGTGTCTCTCGGTTCTATCGCCGACAACGGTGGAGCTGTGCCGACCCAGGCCCGAGTGAAGGTTAGCACGACTCAGAGCGACGCCGGTCTCATCAAGACCGTGACGACGCCGTCCTGGTCCCCGACCCGCATCACCGGCCTCACTGAGAACACGCAGTACTACGTGTCCGAGGCCGCGTACAACGCAGTCGAGAACGGTGGATGGGGACCGTACGGAGCGTGGGTACCGCTCAAGACGACCAACCTCGTCCCGAACGGCCCGGTGCTGTCTCTCGACTCCGCGTCCGGCAGCTTCGTGACGCTGGAGTGGGTTGCGCCCACAGACCTCAACGGTGCAACCATCGCCAATTACAAGCTTCGCGTCGGCTCGAACGAGGCGCTGACCGCGAACGTGCAAGAGTTTACCGTCCCCGCCGACACGTTCAGTCAGGTCGTGACCGGTCTGACCCCTGCCTCGAACTACTGGGCTGAGGTCTGGACCGAGACCGACAAGGGACGCGGCTCCGGCTCTGCCCTGTTCGCCTTCTCTACGACGGGTGGAGGCGGATCGACCAGCGGTCTCTGGCTCAACATCGCTGGCGTCAACACATTCTGCGAGGTCTGGTATAGCGGCGCGGACGGCGTGCCGAAGCTCTGCGAGGTCTGGCACAGCGGTGCAGATGGTACTCCGAAGCTGTGTGGTGCATGA

Genome Context

Tertiary structure

PDB ID

abf3b0d60468dff608db1148200352cc7a79adbf7ddf90d3ccaef8ce174c4766

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8032

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence