Protein

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Genbank accession
QIE02565.1 [GenBank]
Protein name
collagen triple helix repeat-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MDSQSLLAGNKLSPATHFDSLAQLAEQWAFNPTVVGSSPTGITLEASIFGCWSLCVYNRYDTSLLNSGDIMTRLPIPDSDSGTWDDILNDFLLIEHNNDGTLRSVARPADVAAKYTKPGPGIPLSDLTVSVQNSINSIGFMTPQVPLPADIGYLAYSFDPLIADGSVGPVAGTIQLVRVVLRSPQTITNIVAHVGTAGGTLTSGQNFAGLYDATGARVALTADQTTAWGTTGAKTMALTAPYAAAAGYYYVAFLSNGTTPPLFRSKTNLGGDFISGTSPANSFRFATNTTGTTLPASMTLNANVVSDKAIMVALT
Physico‐chemical
properties
protein length:315 AA
molecular weight: 32884,64370 Da
isoelectric point:4,75603
aromaticity:0,08254
hydropathy:0,12603

Domains

Domains [InterPro]
ANF00010
Unmapped
20–41
ANF00010
QIE02565.1
1 315
Architecture
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage BRock
[NCBI] 		1913591 Uroviricota > Caudoviricetes > Borockvirus >
Host Streptomyces sp.
[NCBI] 		1931 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIE02565.1 [NCBI]
Genbank nucleotide accession
KX925554 [NCBI]
CDS location
range 100187 -> 101134
strand -
CDS
ATGGATTCGCAGAGTCTCCTTGCCGGTAATAAATTGAGTCCGGCTACCCACTTTGATTCCTTAGCTCAGTTGGCAGAGCAGTGGGCTTTTAACCCAACGGTCGTCGGTTCGAGCCCGACAGGAATCACTTTAGAGGCCAGTATCTTCGGATGCTGGTCTCTTTGCGTATATAATCGTTATGACACATCACTTCTGAATTCAGGTGACATAATGACTAGACTTCCAATTCCAGACAGCGATAGCGGTACTTGGGATGACATTCTTAATGATTTCCTTCTTATTGAGCACAATAACGATGGAACTCTGAGAAGCGTTGCCCGTCCTGCTGACGTTGCTGCCAAGTACACAAAGCCGGGTCCTGGAATCCCTCTATCCGATCTGACAGTGTCAGTTCAGAACAGTATTAATTCCATTGGATTCATGACTCCTCAAGTGCCCCTCCCTGCGGATATCGGCTACTTGGCGTACTCCTTTGACCCATTGATCGCTGACGGCTCTGTGGGACCTGTAGCAGGTACCATTCAGCTTGTACGCGTGGTGCTGCGTAGTCCTCAGACGATTACCAACATCGTTGCGCACGTTGGCACAGCCGGAGGTACCCTTACCTCTGGACAGAACTTTGCGGGGCTCTACGACGCCACCGGAGCGCGTGTAGCGCTTACGGCAGACCAGACTACGGCTTGGGGGACCACAGGCGCCAAGACAATGGCTCTGACGGCTCCTTACGCGGCTGCGGCTGGTTACTACTACGTGGCCTTCCTGTCCAACGGAACTACTCCTCCTCTATTCCGTAGCAAGACGAATCTTGGTGGAGATTTCATTTCCGGTACTTCTCCTGCGAATTCTTTCCGTTTCGCGACGAACACCACAGGAACTACTCTTCCTGCGTCCATGACTTTGAACGCTAACGTGGTTTCTGACAAGGCCATTATGGTGGCGCTAACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6caee042c516d4c523dc8feaa719acb3bcdba291603d7549e859e709a2d3e1df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Streptomyces 5a phage BRock Crossman,A., Baron,S., Jamdagni,P., Khatri,P., Sharma,D., Pandey,M., Goyal,S., Kumar,S., Phogat,A., Chawla,G., Pasricha,M., Gupta,K., Bazzad,D., Aggarwal,V., Poughat,A., Singh,K., Rana,P., Gautam,R., Sharma,V., Tyagi,D., Shahi,A., Jangra,N., Malik,M., Sidhu,P.K., Malik,S., Ghalyan,Y., Sharma,S.S., Malik,A., Chuttani,R., Bamal,N., Bhadula,D., Batra,A., Temple,L. and Nehra,K. 2020-08-27 — GenBank