Protein

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Genbank accession
XNL97777.1 [GenBank]
Protein name
baseplate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MRESKVIVEHDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSVINAQTPSSISLAINFSNTLTEANFFEWMGFDREGTTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCFVSNVDFSLDKNVPVLNVGIESGKFSEVSTFPPAGIVQGEVMSYSPPRVTTNSNILPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKRFAGDMFYNIEPETDVPLTIRNEHISVDFPSARITKRLQFSDLYRIEWDIIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:293 AA
molecular weight: 33738,49090 Da
isoelectric point:5,05432
aromaticity:0,13311
hydropathy:-0,32799

Domains

Domains [InterPro]
IPR056389
ATT
1–292
IPR056389
XNL97777.1
1 293
Architecture
ATT
ATT 1-292 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL97777.1
1 293
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4374
Central domain 11 204 195 0,0603
C-terminal 205 293 88 0,4573
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-204
C-terminal
205-293

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage CPphiVTCCBPA_418
[NCBI] 		3388351 Viruses >
Host Corynebacterium pseudotuberculosis
[NCBI] 		1719 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL97777.1 [NCBI]
Genbank nucleotide accession
PQ773600 [NCBI]
CDS location
range 11941 -> 12822
strand +
CDS
ATGCGAGAGTCAAAAGTTATAGTTGAGCATGATGGCAGAGCGTATCACTTTGACGCTCTGTCAAATTATGATATTAATACCTCCTACGAGGAATTTAAAACTCTTCGTAGGACTATTCATCGTAGAACCAACTATGCTGACTCTGTTATTAACGCACAAACTCCATCATCAATATCGCTGGCTATAAATTTTAGTAATACCCTTACTGAGGCTAACTTCTTTGAATGGATGGGCTTTGATAGAGAGGGTACTACCTTCCTACTACCACTTTATAGCACGAATATTGAACCAACAATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTATACTTTGAAAACTGTTTTGTATCTAATGTTGACTTCTCTCTTGATAAAAACGTCCCAGTGCTGAATGTTGGTATTGAGTCTGGTAAGTTTTCTGAGGTATCTACATTTCCTCCTGCTGGTATTGTTCAGGGTGAGGTTATGTCTTACAGCCCTCCTAGAGTAACTACAAACAGTAATATTTTACCTGCTCTTTTATCCGCTTCTATGTCCTTCCAACAGCAATGCTCTTGGAGAGAAGATAAAAGTGTATTTGACATAAACAAAATATATAATAATAAAAGAGCTTATGTTAATGAGATGAATGCTTCGGCAACAATTGCGTTTTACTACACCAAGCGATTTGCTGGTGATATGTTCTACAATATTGAACCTGAAACTGATGTCCCTTTAACTATCCGAAATGAACATATTTCGGTTGATTTCCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATTTGTATAGAATTGAGTGGGATATAATTCCTACTGCTGATTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d8a94fc41ce9951b672d926f45cfca230dac86f8a7029ee033b873c4a682a24
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50