Protein

View in Explore
Genbank accession
XPQ50141.1 [GenBank]
Protein name
tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARSIQQLNYNAFTGGLITEASPLTFPDGASIEENNFELTKQGYRRRRFGMGAISQQEKLDNRINSPQDLVTYLWDNNGVTGQIFLAVATLYDLLIYDVTDSVPGEKLVYKTQIKGGQRSSLTSHAGQLIVANGKQDLTVIRALGNNLFSERKERLLIRDLTGIPDYSRSTTTEQQVSLLNASKAGYRPSGDELYLSKQYDASTTLPKTPLADISYTFTEKAVIVEGKVEGDGNTHWRYQLKNSLAYPQFMGYPIESFVLERIQDPNNISEYFITVVFREQFFKTRVLTAGLSSNSLSQVNNGVSYKGSITESEYNGFLALSSILKLKEEEAENHPHIYNLWNQGWGEKRMTAAASTDLIWPIDNFHEETLLLPANADDINAVLYPDSQNSSNRTADRFHPRDLEANPQGSSVAPRGRYVIDALDRGASRYTSFYNDMRDKDYDRVLQAFMSHEVTVNGATTVAEYAGRVWYAGFSGDSSGSTIQMSNKILYGQTSDDNIFSCYQEADPTSKEDNLLVDTDGGWVSIDAIDEVVKLVPTDTALMVFATNGVWAIAGVDGNMFQPTASLVIKITDKGALNQQNIVQVDSNLFYWAEDGLYQLESKGFATFNTIPMTKMTINSLVLDLSEEDFLGMSGAYDDRRDRIVWIVDGVEGVSARRELIYHIAFNCFTLNTYYRGDDEDGSYREVLGVVKTPQFLSEVLPSNVVAGSDNVIAGLDNVVANTSTRPGLPSRIAYLSVYNSDEGSFIFFSDNVRDDFKDWGTVDASAYLLTGYVTGGDTSRMKYVPSITVHCNRTETEATVDGVNNESSCLLQAQWEWTNDAFTNKWGPTMQVYRLQRPQIRGLGEPIAEGVQVVTTRNKLRGRGRTVSLLFSTEEGKDCQLLGWSMIAGVNGNV
Physico‐chemical
properties
protein length:896 AA
molecular weight: 99673,90710 Da
isoelectric point:4,78746
aromaticity:0,10045
hydropathy:-0,34866

Domains

Domains [InterPro]
DC_1504
STR
168–892
DC_1504
XPQ50141.1
1 896
Architecture
STR
STR 168-892 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPQ50141.1
1 896
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9906
Central domain 162 461 301 0,7583
C-terminal 462 896 434 0,1598
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-461
C-terminal
462-896

Taxonomy

  Name Taxonomy ID Lineage
Phage phage T4S1-k141_776450
[NCBI] 		3405107 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPQ50141.1 [NCBI]
Genbank nucleotide accession
PQ867854 [NCBI]
CDS location
range 33843 -> 36533
strand -
CDS
ATGGCGAGGTCAATACAACAGCTTAATTATAACGCCTTTACTGGCGGTTTAATTACTGAAGCATCTCCTCTGACGTTCCCTGATGGTGCGTCTATTGAGGAAAACAATTTTGAGTTAACTAAGCAAGGCTATAGACGCAGACGTTTTGGTATGGGAGCAATTTCTCAACAAGAAAAACTTGATAACAGAATCAATTCTCCTCAAGATTTGGTGACATACCTTTGGGATAATAACGGTGTAACTGGTCAAATTTTTTTAGCAGTTGCTACTCTTTATGATTTGCTTATCTACGATGTTACAGACAGTGTTCCCGGAGAGAAACTAGTTTATAAGACTCAAATTAAAGGCGGACAACGTTCAAGTCTCACTTCACATGCTGGGCAATTGATTGTAGCAAATGGTAAGCAAGATTTGACTGTTATCAGGGCTCTAGGAAACAATCTCTTCTCTGAGCGTAAAGAGCGCTTGCTAATCCGAGACTTGACAGGTATTCCTGACTATTCTAGAAGCACAACAACAGAGCAGCAAGTTAGTTTGTTGAATGCTTCTAAAGCTGGCTATCGTCCTTCTGGAGATGAGCTTTATCTCTCTAAGCAGTATGATGCTAGCACAACACTTCCTAAAACACCCCTTGCGGATATCAGCTATACTTTCACAGAGAAGGCTGTGATTGTAGAAGGTAAGGTTGAAGGTGATGGAAACACACATTGGAGATACCAACTAAAAAATTCCCTAGCTTATCCTCAGTTTATGGGTTATCCAATAGAGTCTTTTGTACTTGAAAGAATTCAAGATCCTAACAATATATCTGAATACTTTATTACTGTTGTCTTTAGGGAGCAGTTCTTTAAGACCAGAGTTCTCACAGCAGGTCTGAGCTCTAACTCTCTATCTCAGGTAAATAACGGGGTAAGTTATAAAGGATCTATTACAGAATCTGAGTACAATGGCTTTTTAGCGCTCAGTTCTATACTAAAACTTAAAGAAGAAGAAGCAGAGAATCACCCCCACATTTATAATCTGTGGAACCAAGGTTGGGGTGAAAAGAGAATGACAGCTGCTGCATCAACAGATTTAATTTGGCCTATAGATAACTTTCACGAAGAAACACTGTTGTTACCAGCAAATGCAGATGACATTAACGCAGTCTTATACCCAGATAGCCAGAATTCGTCTAATAGGACAGCAGATAGGTTCCACCCTAGAGACTTAGAAGCAAACCCTCAAGGTAGTTCTGTAGCACCAAGAGGTAGGTATGTTATTGACGCTCTAGACAGGGGTGCTTCAAGATACACTTCCTTTTATAATGACATGCGCGATAAAGATTATGACAGGGTCCTTCAGGCGTTCATGAGCCATGAGGTTACAGTAAATGGAGCTACAACTGTAGCAGAATATGCTGGACGTGTTTGGTATGCAGGGTTTTCAGGAGACAGTTCTGGAAGCACAATTCAGATGTCGAATAAGATTCTTTATGGTCAAACATCTGATGACAACATTTTCTCTTGTTATCAAGAAGCAGACCCAACAAGTAAAGAAGATAACTTACTTGTAGACACTGATGGTGGTTGGGTAAGCATAGATGCTATTGATGAAGTTGTTAAACTTGTTCCTACCGATACAGCTTTAATGGTTTTTGCAACCAACGGTGTATGGGCTATTGCTGGTGTAGATGGTAACATGTTTCAACCAACAGCTTCTCTTGTTATTAAGATTACAGATAAAGGTGCTCTTAATCAACAAAACATTGTACAAGTTGATTCTAACCTTTTCTACTGGGCGGAAGATGGTCTTTATCAATTAGAGTCTAAAGGTTTTGCAACATTCAACACAATTCCAATGACTAAGATGACAATCAACAGCTTGGTTCTAGATTTGTCAGAAGAAGACTTTTTAGGAATGTCTGGGGCATACGATGATAGGCGTGACCGTATCGTTTGGATTGTAGATGGTGTTGAAGGTGTATCAGCAAGACGTGAGTTAATTTATCACATTGCATTTAACTGTTTCACTCTTAATACATATTATCGTGGTGACGATGAGGACGGCTCTTATCGAGAAGTCTTAGGTGTTGTTAAGACACCTCAGTTTTTATCAGAGGTCCTCCCAAGTAATGTTGTTGCTGGTTCTGACAACGTTATTGCTGGTTTAGATAATGTTGTTGCTAATACCTCAACACGTCCCGGACTACCATCCAGAATTGCTTACCTTTCTGTTTATAATTCTGACGAAGGAAGCTTTATCTTTTTCTCTGATAATGTCAGAGATGACTTTAAAGATTGGGGTACGGTAGATGCGTCAGCTTACTTATTGACAGGTTATGTAACAGGTGGTGACACTTCTCGTATGAAGTATGTACCGAGTATAACAGTTCATTGTAACAGAACAGAGACAGAAGCAACTGTTGATGGAGTAAACAATGAATCAAGCTGTCTGCTACAAGCGCAATGGGAATGGACTAATGATGCTTTCACTAATAAGTGGGGACCAACTATGCAGGTCTATAGGCTGCAACGTCCACAAATACGTGGTTTAGGTGAACCAATTGCAGAAGGTGTTCAGGTTGTGACTACACGTAATAAATTACGCGGCAGAGGAAGAACAGTTAGTTTGCTTTTCTCTACAGAAGAAGGTAAAGATTGTCAACTACTCGGCTGGAGTATGATTGCAGGTGTTAACGGTAACGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
708acc425b0d45746f278bf227b287cfb9ff23419aab81268c86482e6a106286
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2820
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Oyster Virome Dataset Enhances the Classification of Zobellviridae Phages Chen,Y. and Jiang,J. 2025-09 — GenBank