Protein

View in Explore
Genbank accession
WVS23964.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MTESLNSRVAKFDEIVTNVDTWVKGGSADTVDFGGGPVDSPAKLIEGQRTDIAAAAAALISQKDEQINQQANGVLAQANAAASNANGSAGAAAASAASAAASASDSAASAADAAASSAQKFVTSAGAANQKPNTSYTYINPLSRVCTITGGGDGSNFQMIGYGHNRQKFLGAATTGVWNYLPANGIANLSFYKKAGDGTRTKLTYTSGTPTGNQWAGTVGASSVSWTLGTALGVLEQLYVEDPYAVIATTGTQPDYSWIGGGYDNVVDRGVMQHVTGAHNRVLDGDHTTMLGGSYHINDGGSYNAFCGGTDNWNGSGATLGSGHFGGLRNYCSGSTSGTTFAQSCKVNSAYSWTHGYLNTINGTACSVGGRNNTASGSDSAVFGNGNTSTANYSFAFGNGNTVGHHYARSLGGYKGSTLYQGELLVWAYRDTSLGTNPFVSRRQVPLSVVTSTTASALLATLDGITNLTMPISTAWKCTLEVFARSTALRCAAFELKFRASTDSSGTLILGAPTVVWSDVDANFGTAANAASVSVVANGNAINCVVQPRVDSPVGAKWGAVLHINEVN
Physico‐chemical
properties
protein length:568 AA
molecular weight: 58184,22330 Da
isoelectric point:6,19462
aromaticity:0,08451
hydropathy:-0,11884

Domains

Domains [InterPro]
DC_0261
STR
1–317
DC_0261 DC_0296
IPR011049
STR
301–423
IPR011049
IPR011049
STR
301–410
IPR011049
WVS23964.1
1 568
Architecture
STR
RBD
STR 1-423 | RBD 433-568
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVS23964.1
1 568
Domain Start End Length (AA) Confidence
N-terminal 1 239 239 0,5411
Central domain 240 438 200 0,7299
C-terminal 439 568 129 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-239
Central
240-438
C-terminal
439-568

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage QkW1
[NCBI] 		3119620 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVS23964.1 [NCBI]
Genbank nucleotide accession
PP236382 [NCBI]
CDS location
range 25821 -> 27527
strand +
CDS
GTGACCGAATCACTGAACAGCCGCGTCGCCAAGTTCGACGAGATCGTCACCAACGTTGACACGTGGGTGAAGGGCGGGAGCGCCGACACCGTTGATTTCGGTGGCGGCCCGGTCGATTCGCCCGCAAAGCTCATCGAGGGCCAGCGAACAGACATCGCTGCTGCTGCTGCGGCGCTGATCTCGCAGAAGGACGAGCAGATCAACCAGCAGGCGAACGGCGTGCTGGCGCAGGCGAACGCGGCGGCCAGCAATGCAAACGGCAGCGCTGGCGCGGCGGCGGCTAGCGCAGCGAGTGCGGCGGCATCGGCGTCCGACAGCGCTGCGAGCGCGGCTGACGCCGCTGCGTCGTCGGCCCAGAAGTTCGTGACGTCGGCCGGTGCGGCGAACCAGAAGCCGAACACGTCCTACACCTACATCAATCCGCTGTCGCGCGTGTGCACCATCACCGGCGGCGGCGACGGCTCGAACTTCCAGATGATCGGGTACGGCCACAACCGCCAGAAGTTTCTTGGCGCGGCCACCACTGGCGTCTGGAACTACCTGCCGGCCAACGGCATCGCCAACCTTTCTTTCTACAAGAAAGCTGGAGATGGCACACGCACAAAACTGACGTACACATCCGGCACTCCGACCGGCAACCAGTGGGCAGGCACTGTTGGCGCAAGCAGCGTCTCCTGGACGCTCGGCACAGCCCTTGGCGTGTTGGAGCAGCTGTACGTCGAAGACCCGTACGCGGTGATCGCGACGACTGGCACGCAGCCTGACTATTCCTGGATCGGCGGCGGCTACGACAATGTGGTGGATAGGGGTGTGATGCAGCACGTCACGGGCGCGCACAACCGTGTCCTGGATGGCGACCACACCACGATGCTGGGCGGAAGCTACCACATCAACGACGGAGGAAGCTACAACGCATTCTGCGGTGGCACAGACAACTGGAATGGATCGGGCGCTACGCTGGGCAGCGGGCACTTCGGCGGCCTGCGGAACTACTGTAGCGGATCGACGTCTGGCACAACCTTCGCCCAGAGCTGCAAGGTGAACTCGGCGTACAGCTGGACGCACGGTTACCTGAACACCATCAACGGCACGGCATGCTCGGTCGGCGGGCGCAACAACACCGCATCCGGGTCGGACTCGGCCGTCTTCGGCAACGGCAACACCAGCACCGCCAACTACTCGTTCGCCTTCGGCAACGGCAACACGGTAGGCCACCACTACGCCCGTAGCCTGGGCGGGTACAAGGGAAGCACGCTGTACCAAGGCGAGCTGCTGGTCTGGGCGTACCGCGACACTTCGCTCGGCACGAACCCGTTCGTGAGCCGCCGGCAAGTCCCTCTGTCCGTCGTCACCAGCACCACCGCATCCGCGTTGCTCGCCACACTGGACGGGATCACCAACCTCACGATGCCTATCAGCACCGCCTGGAAGTGCACGCTGGAGGTGTTCGCGCGCAGCACGGCCCTGCGGTGCGCCGCGTTCGAGCTGAAGTTTCGGGCCAGCACCGATTCATCAGGCACTCTGATCCTGGGCGCGCCGACCGTGGTCTGGTCCGACGTGGACGCGAATTTCGGCACGGCTGCCAACGCTGCCTCGGTCTCGGTCGTCGCCAACGGCAACGCCATCAACTGCGTGGTGCAGCCACGGGTCGATTCTCCAGTCGGCGCAAAATGGGGCGCCGTGCTGCACATCAATGAGGTGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
11fe32baef7c524ccab42239ce8cbf6170665d565261918c593119f33fed8330
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7617
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a Ralstonia pseudosolanacearum Bacteriophage and Its Application in Biocontrol of Bacterial Wilt Huang,B. 2025-11-25 — GenBank