Protein

View in Explore
Genbank accession
QYW05609.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIEVNCFADLRTTAPAKAGDMALLKRYYDKDSSFRGGGYFIGFPQTKDLPADDGGITAVDANKSFFWKRVVNDPEEINLFHFGGRCDGKTDDSDAFLRNFMWTCKSADGNDTIGVRFPTGTTLINPIDLTHLGEIPVFAIYGDTRSDKGWRPRVKLISNQGEATVFKFNARRTIVRGLNWNGQCYPVKDGKKVDVSTIVGAVMPEQRSNNQIFLENICTMGQYIGVQCFRAESNGGSALKFQDTIDTSITEIYGSKSYGAVIEAKWSNTVQAGWNHSTAVRLENGNFQYGYGPAVLDMPRMTQAFMKNVWIEHTRFPGNMNDGQWVLEGNSIESSDNPLNLANTRCVINGYYFQGVGTMNLERASSPDNWLSGYERGNIRTETYGIIMTDACFRAGYYTGYKITNNTDQDKWFYLGSYSFPKVNQVWQIELLGTAPNVVPNTKLQQPTQMDGMGRRVITMQRCISPQKKVYADMHMEGTDAIADVVYQRLWEDYGKVWVKLKANSGDTIFNLTTTGPTRFEAGVCTLFSDGPIECVDPVLTEMTTSVEKNQKDYARPQARFSLHNGLAGVGANEQGLITIQTKDATAPKDTTKPAGYVSVNINGVDRLLPYY
Physico‐chemical
properties
protein length:612 AA
molecular weight: 68246,10870 Da
isoelectric point:6,16609
aromaticity:0,10948
hydropathy:-0,41846

Domains

Domains [InterPro]
DC_0717
ATT
1–100
DC_0717 DC_0716
IPR012334
STR
77–438
IPR012334
QYW05609.1
1 612
Architecture
ATT
STR
ATT 1-100 | STR 101-612
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW05609.1
1 612
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,9802
Central domain 93 419 328 0,9749
C-terminal 420 612 192 0,8221
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-419
C-terminal
420-612

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_25
[NCBI] 		2866691 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW05609.1 [NCBI]
Genbank nucleotide accession
MZ475898 [NCBI]
CDS location
range 207862 -> 209700
strand +
CDS
ATGATTGAAGTAAACTGTTTCGCAGATTTACGCACTACCGCTCCAGCAAAGGCTGGCGACATGGCGTTACTGAAACGTTACTATGACAAAGACAGTTCGTTTCGTGGGGGCGGCTACTTCATCGGCTTTCCGCAGACAAAAGATCTGCCTGCAGATGATGGTGGTATTACGGCAGTAGATGCAAACAAAAGTTTCTTCTGGAAGCGTGTTGTGAATGACCCAGAAGAGATTAACCTGTTCCACTTCGGTGGTCGCTGCGACGGCAAGACAGATGACAGTGACGCGTTCCTGCGTAACTTCATGTGGACGTGTAAGTCTGCTGACGGCAACGACACTATTGGTGTTCGCTTCCCGACAGGCACAACGTTGATCAACCCTATCGATCTTACTCACTTGGGTGAGATACCTGTGTTCGCTATCTATGGTGACACACGTTCTGATAAGGGCTGGCGTCCTCGTGTCAAGCTGATCAGTAACCAAGGCGAAGCTACTGTATTCAAGTTCAACGCTCGCCGCACTATTGTTCGTGGCCTGAACTGGAACGGTCAGTGCTATCCTGTGAAGGACGGCAAGAAGGTAGACGTGTCCACGATCGTGGGTGCTGTCATGCCTGAGCAGCGTTCAAACAATCAGATCTTCCTTGAGAACATCTGTACTATGGGTCAGTACATTGGCGTACAGTGCTTCCGTGCTGAGAGCAACGGCGGATCTGCATTGAAGTTCCAAGACACCATCGATACTTCTATCACAGAGATCTATGGCAGTAAGAGCTACGGTGCTGTGATTGAGGCCAAGTGGTCGAACACAGTGCAGGCAGGTTGGAACCACTCTACTGCTGTGCGCTTAGAGAACGGTAACTTCCAGTACGGCTACGGCCCTGCTGTGTTAGACATGCCGCGTATGACTCAGGCGTTCATGAAGAACGTCTGGATTGAACACACGCGCTTCCCAGGTAATATGAATGATGGTCAATGGGTGCTTGAAGGTAACTCTATTGAGAGTTCTGACAACCCACTCAATCTGGCCAACACTCGTTGCGTGATCAATGGCTACTACTTCCAAGGCGTTGGGACAATGAACTTGGAACGTGCGTCAAGCCCTGACAACTGGCTGAGTGGCTACGAGCGCGGCAACATTCGTACTGAAACATACGGTATCATCATGACCGATGCTTGCTTCCGCGCAGGCTATTACACGGGTTATAAGATTACCAACAATACAGATCAGGACAAATGGTTCTATCTGGGCAGCTATTCATTCCCGAAAGTGAATCAAGTGTGGCAGATTGAACTTCTGGGTACTGCACCAAACGTTGTACCGAACACGAAGCTGCAACAGCCTACACAGATGGATGGCATGGGTCGTCGTGTTATCACAATGCAACGCTGTATCTCACCGCAGAAGAAAGTGTATGCTGATATGCACATGGAAGGAACGGACGCAATCGCCGATGTTGTGTACCAGCGTCTGTGGGAAGACTACGGCAAGGTGTGGGTTAAGCTGAAAGCCAACAGTGGCGATACTATCTTCAACCTGACCACCACTGGTCCGACTCGTTTCGAAGCAGGTGTTTGTACGTTGTTCAGCGACGGTCCAATTGAATGCGTGGATCCCGTTCTGACCGAGATGACCACCAGTGTCGAAAAGAATCAGAAGGACTATGCGCGACCTCAGGCTCGTTTCAGTTTGCACAATGGCCTTGCAGGTGTAGGCGCAAACGAGCAGGGTCTCATCACTATTCAAACCAAAGACGCTACAGCACCGAAAGATACCACTAAGCCTGCTGGCTATGTGAGTGTCAATATCAACGGTGTTGATCGTCTCTTGCCTTACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3dca25e2bfa84033804c7a02c93e6db0a42e693ca538f580998834e1264fc78
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_25 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank