Protein

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Genbank accession
UPU15648.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVDLGGYKVIYDKETQRAYSLPPGLASGTTAISLSTAAVLVHSAGSVDLGALAVTREEYVTLPGSFDSGSTLNVKNELLIYTDGKYRWNGAFPKTVAPGSTPETSGGVGLGAWLSVGDAALRGELIKGFNGGYLKRTTVAEIASSIFPVGAQLTVTDRADGHFTVVPGGTANGTYILDAGNGNTAVYQIPADGFVNVKALGGKSGVDSSAAILAAHSLSTLVHYPDDDVYQISYDVNTANRSFITYSGQTGIRITGSAATIKDVSVFAVGTSYLVDIFKFVACKDVYINVNFDATPLPDLTAPPPEGLGYKGSSAIYLEGYCEHVTVDNRMSNVRYGVRQGGYSNPAFGGANNIRLRTRCYQVGYPIACYTASNLELDIDSNIQHRAAYLSGCINVRGTIAFAGYTYAEIGVLLGDSISVVSDTDVDRRVNSCRNIKLNIVDRGSVNNLTNRAACGITQSWRAPNVAHNNIHLHLQLKTNNATRTLAGFRLQSVPGVGWMGGNIYSDIKVSGVIDRTEQTLSGSQWADYSIIGIEDGETGPYPNSPTFDGIDFSELRIVKGSVTGNISQLLVPNATGVINLKNARQGITLSVDAPGARVILTNAAFASVTGVGVIYPSINNGVNGYRVDDDGSIEQWMLVNFTAAAGTSQSFNFPKAFSNACRGVSVTPVGSSTVTATLTAAPTSSSVTISCNATGASLYIKANGY
Physico‐chemical
properties
protein length:744 AA
molecular weight: 78242,72510 Da
isoelectric point:6,38293
aromaticity:0,08602
hydropathy:0,00296

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 G3DSA:2.60.40.3940
DC_0071
STR
1–743
DC_0071
IPR040775
RBD
91–156
IPR040775 IPR054075
UPU15648.1
1 744
Architecture
ATT
STR
ATT 1-166 | STR 167-744
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPU15648.1
1 744
Domain Start End Length (AA) Confidence
N-terminal 1 246 246 0,9949
Central domain 247 642 397 0,9852
C-terminal 643 744 101 0,9808
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-246
Central
247-642
C-terminal
643-744

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STP55
[NCBI] 		2924713 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPU15648.1 [NCBI]
Genbank nucleotide accession
OM688977.1 [NCBI]
CDS location
range 48376 -> 50610
strand +
CDS
ATGAACGAGATGTTTAGTCAAGGTGGTAAAGGTTCAACTGGAATCTTAACCAACAAACAAGCAGTAGCCAGACACTTTGGTGTTAAACAATCTGAGGTTGTTTACTTTTCAGTTGGTGTAGATTTAGGTGGGTACAAGGTTATCTATGACAAGGAAACGCAGAGAGCTTATTCCTTACCTCCTGGTCTTGCTTCTGGTACTACTGCCATCAGTCTTAGTACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTAACTAGGGAAGAATATGTAACCCTACCTGGTTCATTTGATTCTGGTTCTACGCTTAATGTTAAAAATGAATTACTCATTTATACAGATGGTAAGTATCGTTGGAATGGTGCATTCCCTAAAACCGTTGCTCCTGGTTCAACACCTGAAACATCTGGCGGCGTTGGTTTAGGTGCATGGTTAAGTGTTGGGGATGCAGCGTTGCGTGGAGAATTAATAAAGGGGTTTAATGGGGGATACCTTAAGCGGACAACTGTAGCAGAAATAGCATCAAGTATCTTCCCTGTGGGGGCGCAACTTACTGTAACGGACCGTGCTGACGGTCATTTCACTGTTGTGCCTGGTGGCACTGCAAATGGAACGTATATCCTCGATGCCGGTAACGGGAACACGGCTGTTTACCAAATCCCTGCTGATGGTTTTGTGAATGTAAAAGCGCTGGGTGGTAAATCTGGCGTTGATAGCTCGGCTGCAATCCTTGCCGCACACTCATTAAGTACGCTAGTTCATTACCCTGATGATGATGTTTACCAGATAAGCTATGACGTAAACACAGCAAACCGATCATTCATTACTTATAGTGGGCAAACCGGTATCCGCATTACGGGGTCTGCCGCAACTATTAAAGACGTCAGTGTTTTCGCAGTTGGTACTAGCTATCTTGTAGACATTTTCAAATTTGTCGCGTGTAAAGACGTCTACATCAACGTTAACTTTGATGCGACTCCTCTACCTGACCTTACCGCGCCACCACCAGAAGGCCTTGGTTATAAAGGGTCATCTGCAATCTACCTGGAAGGCTACTGTGAACACGTTACTGTTGATAATCGGATGAGTAACGTTCGTTATGGGGTTCGACAAGGGGGGTATAGCAATCCAGCATTTGGAGGAGCTAACAACATCCGGCTACGCACACGCTGCTACCAGGTTGGATACCCAATTGCGTGCTATACCGCAAGCAACCTGGAGCTGGACATCGATAGTAACATTCAACATCGTGCGGCTTACTTGTCTGGTTGTATAAACGTTCGCGGTACAATAGCATTTGCAGGTTACACCTACGCAGAAATTGGGGTGCTTCTTGGAGACTCTATTAGTGTTGTATCTGATACAGATGTAGATCGCCGCGTGAATAGTTGCAGGAACATCAAACTCAACATTGTAGACCGTGGGTCCGTAAACAATCTAACTAACAGAGCTGCATGTGGTATCACTCAGTCATGGAGAGCACCAAATGTAGCTCACAATAATATCCACCTGCACTTGCAGCTGAAGACCAATAACGCAACAAGGACACTTGCTGGATTCCGATTGCAGAGCGTTCCCGGCGTTGGTTGGATGGGCGGCAACATATATAGTGATATCAAGGTCAGTGGTGTGATTGACAGAACCGAGCAAACCTTGTCAGGTTCACAGTGGGCTGACTATTCAATCATCGGCATTGAAGATGGAGAGACAGGCCCATACCCAAACTCACCCACATTCGACGGTATTGATTTCAGTGAACTACGCATCGTTAAAGGCAGTGTAACTGGGAATATAAGTCAACTTCTGGTCCCTAATGCCACTGGTGTTATTAATCTCAAGAATGCGCGCCAAGGTATTACTCTATCTGTCGACGCTCCTGGTGCGAGAGTAATATTAACCAATGCAGCATTTGCATCTGTCACTGGTGTTGGTGTTATTTATCCAAGCATTAACAATGGGGTTAACGGATATCGTGTAGATGATGACGGTAGCATTGAACAATGGATGTTGGTTAACTTTACGGCAGCAGCTGGAACATCACAAAGTTTTAACTTTCCCAAAGCATTTAGCAATGCATGCAGGGGGGTATCAGTAACCCCGGTTGGATCAAGTACGGTTACAGCGACATTGACTGCTGCTCCAACAAGTTCGTCTGTCACAATTTCATGTAACGCTACGGGAGCTAGTCTGTATATCAAGGCTAATGGTTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ec6a0962045d7bf05cc762d8eecc0298577e21f40b62305c8e49c293f339a7e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50