Protein

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Genbank accession
AGI61457.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MHLPNGSQIFVESNRGSAIDATAVSNAKDPVFTVASGGTAYKKGDYVIITASSWGKLIDRVMRVKTDGEETSVTLEGVDTTDQNVFPSGGTASFAKIDAWTEIPCVQDLSQDGGEQQYYTYQCLSDDQEQQLPTYKSAVSLTYTFAHEYDNAIYPLLRSADESGEVTALRMYVPKAKEMRCWAGVLSFNEIPQTTVNEMETVSLSVSLKGRFTFLPSQVA
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24101,58940 Da
isoelectric point:4,59119
aromaticity:0,09545
hydropathy:-0,28636

Domains

Domains [InterPro]
DC_0037
ATT
1–51
DC_0037 IPR014918
AGI61457.1
1 220
Architecture
ATT
TAS
ATT 1-51 | TAS 52-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage pSf-1
[NCBI] 		2496551 Uroviricota > Caudoviricetes > Drexlerviridae > Hanrivervirus > Hanrivervirus pSf1
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGI61457.1 [NCBI]
Genbank nucleotide accession
KC710998 [NCBI]
CDS location
range 34424 -> 35086
strand +
CDS
ATGCATTTACCAAATGGATCGCAAATTTTCGTTGAGAGCAATCGCGGAAGCGCTATTGATGCAACGGCAGTATCAAACGCTAAAGATCCTGTATTCACCGTTGCATCTGGCGGAACTGCGTACAAGAAAGGTGATTATGTTATCATCACTGCGTCTTCTTGGGGTAAGCTGATTGATCGTGTTATGCGTGTAAAGACTGACGGTGAAGAAACAAGCGTGACTCTTGAAGGCGTAGATACTACTGATCAGAACGTTTTCCCGTCTGGCGGTACTGCATCTTTTGCCAAAATTGATGCATGGACTGAGATCCCTTGCGTTCAGGATTTGTCGCAGGACGGCGGCGAACAGCAATACTACACTTATCAGTGTTTGTCAGACGATCAGGAACAGCAGTTACCTACCTATAAGAGCGCCGTTTCTCTTACCTACACTTTTGCGCACGAATACGATAACGCGATCTATCCGCTATTGCGTTCAGCAGATGAATCGGGCGAAGTAACCGCGCTTCGTATGTATGTACCAAAAGCAAAAGAGATGCGTTGCTGGGCTGGTGTACTTTCATTTAACGAGATCCCACAAACGACCGTTAACGAAATGGAAACCGTTTCCCTGTCTGTATCCCTGAAAGGTCGATTCACCTTCCTACCTTCTCAAGTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0c5c7af7a5597bf5ef9dd0c6740675ba75bfebba52f0c27bd6b9f9a2759eef5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9582
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of the Shigella bacteriophage pSf-1 Jun,J.W., Kim,J.H., Shin,S.P., Han,J.E., Chai,J.Y. and Park,S.C. 2013 24012542 GenBank