Protein

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Genbank accession
XFA12317.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSDLDNAINSINASAVKAENTATFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTAAESDINQAVADAAQSATDAQDAADSIGRYQGLWPDSGGIADKGDTYQTQVSGTPTGQYFTALQNTTTDPVDDSVYWREIVSFSSISKLGFLYLASYIPAPFIDGADITQFLKQAIDDAITTGKTLVGDGRSWSISDEIALSGNSVSANGLLWMSGNTKFTQTDATKNGFVINGRGGITGDHLHITLPQITVPVVGVEPKALEFIGTAGWCRITEFVSYGGYHGIYSSGSAAFSLVFDKIRIYNTYSSHFKWLSDATDTTVSITNFQGDNVINDDYAFDVRELTTGNGIENLYVRMISLDQCTRAIYCRSRYAEFHQVYTERLRGDRWQSNFSAFDFGNVFEQPSITGLRATFSTVVPAGLSDLRVIELDGGDLFSVRVGGKAGVTPFENYADGMPDSEEYQMILTTTKSCRVDSITDNSGGKYSGFFQGSVFGLSDVRSGSGSVFSIKPNSKKPTNPSLISGIQTTTDDGSGGGGSTYQAGLVFGSSPMAVGAVNNGSFVLDDFTWSAILPYGDGVNRKGGLVGYVQGTSTTAPLRPQKAFQVMSDTTFRFSGDLRPETDGSGSVGQPNFKFDSGHFVNPPNTTSDKTLKTDNTEIHQYLLDAALEVKGNIQMWRWIQRKEDKGDNARYHIGPMAQDIYDIFKKHMDIAGVDDDPFNYSFVGKDKMVESVKTGEKEVIVDGEVYIEDVYEDIQTGPDEWNIRANDLMWLIIAAL
Physico‐chemical
properties
protein length:777 AA
molecular weight: 84444,30180 Da
isoelectric point:4,53333
aromaticity:0,10425
hydropathy:-0,31377

Domains

Domains [InterPro]
DC_0090
STR
1–774
DC_0090
IPR036388
RBD
635–777
IPR036388
IPR030392
CHP
648–709
IPR030392
IPR030392
CHP
648–777
IPR030392
XFA12317.1
1 777
Architecture
STR
STR 1-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFA12317.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,9942
Central domain 171 476 307 0,9794
C-terminal 477 777 300 0,9092
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-476
C-terminal
477-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BUCT787
[NCBI] 		3279184 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFA12317.1 [NCBI]
Genbank nucleotide accession
PQ166232.1 [NCBI]
CDS location
range 16533 -> 18866
strand -
CDS
ATGAGCGATTTAGACAACGCTATAAATTCAATTAACGCATCAGCAGTTAAGGCAGAAAATACCGCTACCTTTCTGGATGATATGTCGACGTTTGACGATCAATCAAGCGTAACCAACCCAAACAACGGGCAAACTGTTGCTTCTATCCCTAAGCAGGTAAAAGATCGCACAGATGAGCTATTCACCGCTGCTGAGTCGGATATCAATCAAGCAGTAGCTGATGCAGCACAAAGCGCAACAGACGCGCAAGATGCTGCGGATAGTATTGGTCGTTATCAAGGTTTATGGCCTGATTCTGGCGGCATTGCTGATAAGGGCGACACATATCAAACTCAAGTGAGCGGCACGCCTACAGGGCAATACTTTACAGCGCTACAAAATACAACAACTGACCCAGTTGATGATAGTGTGTACTGGCGGGAGATTGTTTCATTTTCATCAATTAGCAAGCTTGGGTTTTTGTATCTAGCGTCATACATACCCGCGCCGTTTATTGATGGTGCTGATATTACTCAGTTTTTAAAGCAGGCCATCGATGATGCAATAACGACAGGGAAGACGTTGGTTGGTGACGGGCGCTCATGGTCTATTAGTGATGAAATTGCTCTGTCTGGGAATTCGGTTTCTGCTAATGGCTTACTATGGATGTCAGGAAATACAAAATTCACTCAAACTGACGCCACCAAAAACGGATTCGTTATAAATGGGCGAGGGGGGATTACTGGAGATCACTTACATATAACATTACCGCAAATAACCGTCCCTGTGGTGGGTGTGGAGCCGAAAGCACTTGAATTCATAGGAACTGCGGGGTGGTGTCGAATTACTGAATTTGTAAGTTACGGAGGTTATCACGGTATCTATTCTAGTGGAAGCGCTGCGTTTAGCTTGGTGTTTGATAAAATTAGAATTTACAACACGTACTCAAGCCACTTCAAGTGGCTATCTGACGCAACGGACACAACGGTTAGTATTACTAATTTTCAGGGTGACAACGTAATCAACGATGATTACGCCTTTGATGTTCGAGAGCTAACAACGGGCAACGGAATTGAAAATCTTTACGTAAGAATGATTTCCTTAGACCAGTGCACTAGAGCTATATATTGTCGATCTCGCTATGCCGAGTTCCATCAAGTTTACACTGAGCGATTGCGCGGAGATAGATGGCAAAGTAACTTTAGTGCGTTTGATTTCGGTAATGTTTTCGAGCAGCCATCGATAACTGGTTTGAGGGCTACGTTTTCCACCGTAGTTCCAGCAGGGCTTTCAGACTTGCGGGTAATCGAGCTAGACGGCGGAGACTTATTTAGCGTTCGAGTTGGAGGTAAGGCAGGAGTAACACCTTTCGAAAATTACGCAGACGGGATGCCCGACTCTGAAGAATATCAAATGATATTAACAACAACTAAGTCTTGTAGGGTTGATTCAATTACTGATAATTCAGGTGGCAAATATAGTGGTTTTTTTCAGGGTTCAGTTTTCGGCCTGTCAGACGTAAGAAGCGGCTCGGGAAGTGTGTTCTCAATAAAGCCAAACAGCAAAAAACCTACGAATCCATCTCTAATTTCTGGAATTCAAACCACTACGGATGATGGAAGTGGTGGGGGAGGGTCTACATATCAGGCAGGGCTTGTTTTTGGTTCGTCACCAATGGCTGTCGGCGCGGTTAATAATGGATCATTTGTTTTAGATGACTTTACATGGTCTGCAATATTACCTTACGGTGACGGGGTAAACCGAAAAGGAGGACTTGTTGGTTACGTGCAAGGGACATCAACCACTGCCCCTTTAAGGCCGCAAAAAGCATTTCAGGTTATGAGTGATACCACATTTCGTTTTTCTGGTGATTTAAGACCAGAAACTGACGGAAGCGGCAGCGTTGGGCAGCCTAACTTTAAATTTGATAGTGGGCATTTTGTTAATCCGCCGAACACAACGTCAGATAAAACACTGAAAACAGATAACACTGAGATACATCAATATCTTCTTGATGCGGCATTGGAGGTTAAAGGTAACATTCAAATGTGGAGGTGGATTCAGCGTAAGGAAGACAAAGGGGATAATGCTAGATACCATATTGGCCCTATGGCTCAAGATATTTATGATATTTTCAAAAAGCACATGGATATCGCCGGGGTTGATGATGACCCGTTTAATTATTCATTTGTCGGCAAAGATAAAATGGTCGAGTCTGTAAAAACGGGTGAAAAGGAGGTCATCGTAGATGGTGAAGTGTACATTGAAGATGTTTATGAGGACATTCAGACAGGCCCTGACGAATGGAACATTAGGGCAAATGATTTGATGTGGTTGATAATTGCGGCCCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0d2c9f2ea19ef1e1bf30f4d881ff41f05390941bf6ccd382bffb1d0d5d148d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6984
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50