Protein

View in Explore
Genbank accession
WDS38267.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MIVPMAAAAFASAVTFVSATAATISAIGGLTITAGTTLTVAGVAKLGMAAMSLYSMTRKPKAAAGSPSPIAFKADPNAYIPFVAGGPVATGGNIVHLRATGAKHKYLVYLTALSHGGPIHSYGDFTADDSVVTFGADQGEGATGTYLNRMWQRFAVGLMAGTALALTSVGSKDTPGDHGGHPAEWTGTHRLCGIAHTMLCLEADPAKYPAIPKPLWVVRGGPVYDPRKDSTVPGGSGTQRASDRTTWSTDGNQNPFLQALTFAIGHVYNGIRVGGVGMPVKGIDVQAFVYGANVADANNWKIAWVWNTGMRKWDVLATMLQAGAGQPLVRAGMLSCSVEAPRVSLDTITEADLRGDFSVTGSANTRTRKNTLIPRCKSPNHKWAVVPFGEVTGAVYVAEDGGVRRPMEVEYEAVSADDGGVQVRQLAAYDLTNLREGLVATIPCSARFLKYRAGDCLTVNAPSTLMNGQKVVVQKREFDVERRIMLLTVRSETDGKHAYALGQTDAPPPSPTLTGNDGLVIEAPDPDAWTVTPGTSTGTGPVIPTIVVTPTDPTGAHYDDPAATHVVVRYRIYGLNPDTGQPYPWVYEEYPATASRIELKGAAPGTVYEVQIAYRVRGIVGDFRSYGNVTTGDLIATSTLFLGIGPDKRPALDVIRETSALGEAALANVVNIVKNRGWAEALLFLEGKSLGTIVLDEIRPFIEGATIELQHLSLLGVASPDGSSFILDIDTVRISPTETFAQRLSNIGGRLGGAELDILHQSTLIYDLQTGKANVSDLTFLSLQVSGQSANITQLFNITYAQGQIIDASATLAINVNNQITGYKVNGVTREFDILASVFRVWDGVSAVPMFAVDGSGAYVAGSKVRTDSLQNNAVTVPDIQVASWTMGGTGGEQLILAGGVSMARAGFVRASASVAQHFPSGDRNWSFRLEIAGQNAYQCYGANGQDSVPLSGAVYVGAGYTPVYLWWNGQSSVNIDYRALEVLGVMK
Physico‐chemical
properties
protein length:988 AA
molecular weight: 104416,05250 Da
isoelectric point:6,01421
aromaticity:0,07996
hydropathy:0,02470

Domains

Domains [InterPro]
DC_0187
STR
1–921
DC_0187
WDS38267.1
1 988
Architecture
STR
STR 1-921 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS38267.1
1 988
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,9250
Central domain 14 212 200 0,2283
C-terminal 213 988 775 0,2548
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-212
C-terminal
213-988

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage TMCBR3
[NCBI] 		3028190 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Caulobacter segnis
[NCBI] 		88688 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS38267.1 [NCBI]
Genbank nucleotide accession
OQ330849.1 [NCBI]
CDS location
range 15363 -> 18329
strand +
CDS
ATGATTGTTCCGATGGCCGCCGCCGCGTTCGCGTCGGCCGTCACGTTCGTTTCCGCGACTGCCGCCACGATTTCGGCAATCGGCGGCCTGACGATCACCGCCGGGACCACCCTAACCGTGGCGGGTGTGGCGAAACTCGGCATGGCCGCCATGTCGCTGTACAGCATGACGCGCAAGCCGAAGGCGGCGGCGGGGTCGCCCTCGCCTATCGCCTTCAAGGCGGACCCGAACGCCTACATTCCGTTCGTGGCGGGCGGCCCGGTGGCGACCGGCGGCAACATCGTTCACCTGCGGGCGACGGGGGCGAAGCACAAGTATCTGGTCTATCTGACGGCCCTGTCTCACGGCGGCCCCATCCACAGCTATGGGGACTTCACGGCAGACGATAGCGTGGTGACCTTTGGCGCGGACCAAGGGGAGGGCGCGACCGGAACCTATCTGAACCGCATGTGGCAGCGGTTCGCGGTCGGGCTTATGGCTGGCACCGCCTTGGCCTTGACGTCGGTTGGCAGCAAGGACACGCCCGGCGACCACGGCGGACACCCGGCGGAATGGACCGGCACCCATCGGCTGTGCGGGATCGCGCACACCATGCTGTGCCTGGAGGCCGACCCCGCTAAGTATCCGGCAATTCCCAAGCCCCTGTGGGTGGTGCGTGGCGGCCCGGTCTATGATCCCCGCAAAGACAGCACGGTGCCGGGCGGCAGTGGTACGCAGCGCGCCAGCGACCGCACCACGTGGTCCACGGACGGCAACCAGAACCCCTTCCTTCAGGCGCTGACCTTCGCAATCGGTCACGTCTACAACGGAATCCGCGTCGGCGGCGTGGGCATGCCGGTAAAGGGGATCGACGTCCAAGCCTTCGTCTACGGCGCGAACGTCGCGGACGCGAACAATTGGAAAATCGCATGGGTGTGGAACACCGGCATGCGAAAGTGGGACGTCCTGGCAACCATGCTCCAGGCTGGCGCAGGCCAGCCGCTGGTGCGGGCGGGTATGCTGTCCTGTTCCGTCGAGGCCCCGCGCGTCTCCCTGGACACCATCACGGAAGCCGACTTGCGCGGCGACTTCAGTGTGACCGGCTCCGCCAACACGCGCACCCGGAAAAACACCCTCATTCCCCGGTGCAAGTCGCCGAACCACAAATGGGCGGTGGTCCCCTTCGGCGAGGTTACCGGCGCGGTCTACGTGGCCGAAGACGGCGGGGTGCGCCGCCCCATGGAAGTGGAGTATGAGGCCGTTTCTGCGGATGACGGCGGGGTGCAGGTGCGCCAGCTGGCCGCCTACGACCTGACCAACTTGCGGGAAGGCCTTGTGGCCACCATCCCGTGTTCTGCCCGGTTCCTGAAGTATCGCGCGGGCGACTGCCTGACCGTCAACGCGCCGTCCACGCTGATGAACGGCCAGAAGGTGGTGGTTCAAAAGCGCGAATTCGACGTTGAACGCCGGATCATGCTTTTGACGGTCCGCAGCGAGACGGACGGGAAGCACGCCTATGCGCTTGGGCAGACCGACGCGCCGCCGCCCTCGCCGACCCTGACCGGTAACGACGGGCTTGTGATCGAAGCGCCGGACCCGGACGCCTGGACGGTCACGCCGGGCACCTCCACGGGCACCGGCCCGGTAATCCCCACCATCGTGGTGACGCCCACCGATCCGACCGGCGCGCACTATGATGACCCGGCCGCCACGCACGTGGTGGTCCGATATCGCATCTATGGGCTGAACCCGGACACCGGCCAGCCTTACCCGTGGGTGTACGAGGAATACCCGGCCACGGCCTCGCGCATCGAACTGAAGGGCGCGGCCCCCGGCACCGTGTATGAGGTTCAAATTGCGTACCGCGTGCGCGGCATCGTCGGCGATTTCCGCAGCTATGGGAATGTGACGACGGGCGACCTTATCGCCACGTCGACTCTGTTCCTGGGCATCGGCCCGGACAAGCGTCCGGCCTTGGACGTGATCCGCGAAACCTCGGCGCTGGGGGAAGCCGCCCTGGCGAACGTGGTCAACATCGTCAAGAACCGTGGGTGGGCGGAAGCCCTGCTGTTCCTTGAGGGCAAATCGCTTGGGACGATCGTTCTGGACGAAATCCGCCCGTTCATTGAAGGGGCTACGATCGAACTTCAGCACCTATCGCTGTTGGGCGTGGCCAGCCCGGACGGATCGTCGTTCATTCTCGATATCGACACGGTGCGCATCAGCCCCACCGAAACCTTCGCCCAGCGCCTTAGCAATATCGGCGGGCGGCTGGGCGGCGCTGAACTGGACATTCTGCACCAATCGACGCTGATTTATGACCTTCAGACCGGTAAGGCAAATGTCTCTGACCTGACGTTCCTAAGTCTACAGGTGAGCGGACAGAGTGCGAATATTACGCAACTGTTCAACATTACTTATGCACAAGGACAGATTATTGATGCGTCGGCCACCCTGGCTATCAACGTCAACAATCAAATCACGGGCTACAAGGTAAACGGCGTCACGCGAGAGTTCGATATTCTCGCGTCGGTGTTCCGGGTTTGGGACGGCGTTTCGGCTGTCCCCATGTTCGCGGTGGACGGATCAGGCGCTTATGTGGCTGGGTCCAAGGTCCGCACGGACAGCCTGCAAAACAACGCGGTGACGGTGCCGGACATTCAGGTGGCTAGCTGGACCATGGGCGGGACCGGCGGCGAGCAACTGATTTTGGCGGGCGGCGTGAGCATGGCCCGCGCCGGGTTCGTGCGCGCTTCCGCGTCCGTGGCCCAGCACTTCCCGTCCGGTGACCGCAATTGGTCCTTCCGTCTCGAAATCGCGGGGCAGAACGCATATCAGTGCTACGGGGCCAACGGCCAGGACTCGGTCCCGCTGTCCGGCGCTGTCTATGTCGGCGCGGGCTACACGCCGGTTTACCTGTGGTGGAATGGCCAATCGTCGGTGAACATCGACTATCGGGCGCTTGAAGTGCTGGGGGTGATGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
89ba426b0488f9644abca8916c81af1c097d6573dec71707cd3218f2fc85ce5a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New species of Caulobacter bacteriophages in the Kronosvirus genus that infect the plant growth-promoting Caulobacter strain CBR1 Mohammadi,T. and Millwood,A. 2024-04-20 — GenBank