Protein

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Genbank accession
URQ03157.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,56
Protein sequence
MSGTNIFTHASDEAKYVYLQPFTSPGSAFEAGGDVQSILEQIDPSALLPLPPLPYATPTEDGAVEYSTQAEANALDDLLTVLTPETLDGVDQFVSPATDTQLGNLLELRSSDLTRTYASSDASRLLSYRRLEEMMTTRNALADDTTNESQGFAQFATLAESLAYNPSRIISPMRTWNLIKKEIPNPWAQATETSTGVVRTVAPSDSLKSDASIAISVKGFNHVSATTSKRGAFKLTQNNYDRNASDANEYAITPGTIDNLLATSDKVGFFQLPATFTNDSTQATSAALGYELANKLSPDGGTITGTLQCDNIYSNIVTRQKQYSYGGSYYVNVRETREVFPNNQLDAKIGLAGRPVGSIFHCTENVDPNVVFGGVWYRIRAGQTMIGQGTGDDGVRRRYFSAGTYRDDDRVTLYERHLPSHSHKSWGETYSGSKSACVKYGTYRNPYGVTYYCKEYSYVDYWRFGKSGSRNNIGMGSTDRDNYMYYTSPVGGGQAHENMMPFYPVYIWRRVK
Physico‐chemical
properties
protein length:512 AA
molecular weight: 56500,85370 Da
isoelectric point:5,42087
aromaticity:0,10938
hydropathy:-0,50117

Domains

Domains [InterPro]
DC_0176
STR
1–462
DC_0176
IPR053827
ATT
355–511
IPR053827
URQ03157.1
1 512
Architecture
STR
ATT
STR 1-354 | ATT 355-511 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PVA8
[NCBI] 		2938951 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ03157.1 [NCBI]
Genbank nucleotide accession
ON190024 [NCBI]
CDS location
range 105317 -> 106855
strand +
CDS
ATGTCAGGAACAAACATATTCACGCACGCGAGTGACGAGGCAAAATATGTTTACCTGCAACCGTTCACTTCTCCCGGTTCAGCTTTTGAAGCGGGAGGAGATGTTCAGAGTATTTTGGAGCAAATTGATCCAAGCGCATTGCTACCACTGCCGCCGTTACCTTATGCAACTCCGACTGAGGACGGTGCAGTTGAGTACTCGACTCAAGCAGAAGCTAATGCACTTGATGATTTATTGACTGTTCTTACACCCGAAACATTAGACGGTGTTGATCAGTTTGTATCACCAGCAACCGATACTCAGCTAGGTAACTTACTTGAATTACGTTCAAGTGATTTGACTCGAACATATGCATCGTCAGATGCTAGTCGTTTGCTTTCATATCGTCGTCTTGAAGAAATGATGACGACTAGAAATGCACTTGCCGATGACACAACTAATGAATCTCAGGGGTTTGCTCAGTTTGCAACTCTAGCTGAATCATTAGCATACAACCCATCACGCATAATCTCGCCTATGCGAACGTGGAACTTGATTAAAAAAGAAATTCCAAACCCGTGGGCGCAAGCAACCGAGACATCAACCGGTGTCGTTAGAACAGTAGCACCGAGTGATTCATTGAAATCAGATGCTTCTATCGCGATTAGTGTCAAAGGGTTTAATCATGTATCAGCAACAACTTCAAAGCGAGGTGCGTTTAAGTTAACACAAAACAACTATGATCGCAATGCAAGTGATGCAAACGAATATGCAATAACTCCCGGTACAATTGATAATTTATTGGCTACGAGTGATAAGGTCGGATTCTTTCAACTCCCTGCTACGTTCACAAACGACTCAACTCAAGCAACTAGTGCGGCATTAGGCTACGAACTTGCAAATAAACTGAGTCCAGATGGTGGTACGATTACAGGTACGCTTCAATGTGACAACATTTACAGTAATATTGTTACGAGACAAAAGCAATACAGCTATGGCGGCTCATATTACGTTAATGTAAGAGAAACGCGAGAAGTATTCCCGAACAATCAACTTGACGCTAAAATCGGCTTAGCAGGTCGACCAGTCGGGAGCATTTTCCATTGTACCGAAAATGTAGACCCGAATGTTGTATTTGGGGGCGTGTGGTATAGAATCAGAGCAGGTCAAACAATGATTGGTCAAGGCACGGGCGACGATGGCGTGCGTCGTCGTTACTTCTCGGCAGGGACATATCGCGATGACGACCGAGTTACATTGTACGAGCGCCATTTGCCTAGTCATAGTCACAAAAGCTGGGGTGAAACATACTCGGGTTCTAAATCTGCATGTGTTAAGTACGGTACATATCGAAACCCGTATGGCGTGACGTATTACTGTAAAGAATACAGCTACGTTGATTATTGGAGATTTGGTAAATCTGGCTCTCGCAATAATATAGGCATGGGTTCTACTGACCGAGATAATTACATGTATTACACATCACCGGTAGGTGGCGGTCAAGCTCATGAAAACATGATGCCATTCTATCCCGTTTATATTTGGAGACGAGTTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5014df13101c896049f719cd4d6aec88704892d80bc396bcb6b3735ca2a0b826
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a broad-host-range bacteriophage that prevents Vibrio alginolyticus infections in juvenile turbots farming He,Z. 2023-05-12 — GenBank