Protein

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Genbank accession
QHR73459.1 [GenBank]
Protein name
putative HNH endonuclease
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MNATYETIDFSVAMTNQLFTYDSKTGVIRLKSTGCKIGNINTADGGTRIECNGKTLSGARVAWIIETGNTIPPGFAVVCRQRTPGHYGNRISNLYLVDVARDPNFYA
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11681,10130 Da
isoelectric point:8,90568
aromaticity:0,09346
hydropathy:-0,20187

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR73459.1
1 107
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,1083
Central domain 83 96 15 0,0074
C-terminal 97 107 10 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-96
C-terminal
97-107

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage mckay
[NCBI] 		2696416 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR73459.1 [NCBI]
Genbank nucleotide accession
MN850629 [NCBI]
CDS location
range 9329 -> 9652
strand +
CDS
ATGAACGCTACATACGAAACCATTGATTTTTCGGTCGCAATGACTAACCAGCTATTCACCTACGACAGCAAAACCGGCGTCATCCGTCTGAAGTCCACGGGCTGCAAAATCGGCAACATCAACACTGCAGATGGCGGAACACGTATCGAATGCAACGGCAAGACGCTGTCTGGCGCACGCGTGGCGTGGATTATTGAGACGGGCAATACAATCCCTCCAGGCTTCGCCGTTGTGTGCCGCCAGCGCACTCCAGGGCACTACGGCAACCGCATAAGCAACCTTTACCTGGTAGACGTTGCACGCGACCCGAACTTTTATGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e15fc81adba75e04a1f1427a462ddbbbe5c45756b875bbdd6fa2adb1c5d92b8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank