Protein

View in Explore
Genbank accession
QCW22988.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRDLAIRAVHTNVVTVYDGNRAYDANGAEVTLDESLIEAKITELDISNKWSELRKERNRLLAETDYLALSDLTLSAEMTTYRQALRDLPSNTSDPANPTWPTKPGS
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11968,16620 Da
isoelectric point:4,77325
aromaticity:0,05607
hydropathy:-0,57290

Domains

Domains [InterPro]
DC_0890
STR
1–101
DC_0890
G3DSA:6.10.140.1310
STR
10–87
G3DSA:6.10.140.1310
IPR031893
ENZ
52–105
IPR031893
QCW22988.1
1 107
Architecture
STR
STR 1-105 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW22988.1 [NCBI]
Genbank nucleotide accession
MK799832.1 [NCBI]
CDS location
range 146180 -> 146503
strand +
CDS
ATGACTAGGGATTTAGCAATTAGAGCAGTACATACAAACGTCGTTACTGTTTACGATGGTAATCGTGCATATGACGCAAACGGAGCAGAAGTTACATTAGATGAGAGTCTAATTGAAGCAAAAATAACTGAGTTAGATATTTCAAACAAATGGAGTGAATTACGTAAAGAACGTAATCGTCTTCTGGCTGAAACTGACTACTTGGCATTGTCGGATTTGACACTGAGTGCCGAAATGACAACTTATCGTCAGGCATTGAGAGATCTTCCATCAAATACATCAGATCCAGCCAATCCAACATGGCCTACTAAACCAGGAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
708b5b9276d5337c3ff64ce6b0971c6aa2021972cee3fe59942c63bc2ab954e5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank