Protein

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Genbank accession
AIX41058.1 [GenBank]
Protein name
baseplate wedge initiator
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MANQNFRVKKGIEVGLGATFLYADDSGVGINSASPRSNLDVRGRSQTEELLVDNYAEVQGPSTFVGLGTFGGDLYVGNDLYVKGNLSFTSFESETGNVTGVLTTRDFNVTGLSTFAGDATFQSDVNISGASSITGNLVVSGASTLTGIVTTGDDLYVGGSLYVFNDIFYDEITGRNLSISGIATLRQLEIQQDLEVAGLSTFVGLVSFRDAVGTNLTVYNLSANTGNFVEINVDGGGGGGGGTGIDSTSVNTEFLNVTGVATFNNGIATNFSAEFIDAGVTTTTDLHFTNGYGVNLNMSGITTVGILTVYENIYDSRNQVGYGDSLLVTQGGKLVWTRPDIAGIATSFQPGSTFYVSENGSNTNDGRSPEKAWGSIAYAVSQIGDTSHDILEVTAGEYTETFPITVPKGLTISGAGQRATIVRPSQATETNDGFLLNDRSTIHNITVTGFYKPQGSINYAFKFSVGAAITSRSPYVDKVTVINKGTQTSASDPYGYGSADSYPTTAPGGAGVLVDGSVVATNSLEAAILLNEVTLFTAGNQGIKITNGGRVEWLNGFIYFASEALVGLSDKTTGLAGAGKARLTLENASGGLVGGNTVQYYDSDGTTVLASGTIDNVSGSYVTLTNAGVGTFTTPRNRTAKKVDFVNGAQLSTAQARFGTSSLDVTGAGTDNITVDSTSDFGFGTGDFTVEFWIYRTGNINGKVICDFRDTAATDQAITIQGDGGNETDVYIGTTSVVTGTVPTTLNAWNHIAVCRVGSTITQYIDGAVSGSGTAATDLGVARQLTFGDRYDNSNNGPTAYLDELRVTKGAAKYTGAFTSPSVALTGDKDTSILLHFDGINGATSTTDDIIVLQDIRITGGNTADKVTLADYSQFGADLRSIACAIEYGNQGMIGDGDGVTLRAISINFNHVGALGDITNDPNLAIQSNEVIELNGGQVSYVSIDQKGDFLTILT
Physico‐chemical
properties
protein length:955 AA
molecular weight: 99374,02890 Da
isoelectric point:4,32581
aromaticity:0,08586
hydropathy:-0,03529

Domains

Domains [InterPro]
DC_0407
STR
1–134
DC_0407 DC_0407
DC_0407
STR
128–207
DC_0407 IPR011050 PF13385
G3DSA:2.60.120.200
STR
612–811
G3DSA:2.60.120.200
IPR013320
STR
628–811
IPR013320
AIX41058.1
1 955
Architecture
STR
STR 1-943 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX41058.1
1 955
Domain Start End Length (AA) Confidence
N-terminal 1 406 406 0,8910
Central domain 407 645 240 0,9865
C-terminal 646 955 309 0,3610
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-406
Central
407-645
C-terminal
646-955

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f
[NCBI] 		1493511 Uroviricota > Caudoviricetes > Pantevenvirales > Atlauavirus > Atlauavirus tusconc8
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX41058.1 [NCBI]
Genbank nucleotide accession
KJ019141 [NCBI]
CDS location
range 196595 -> 199462
strand +
CDS
GTGGCGAATCAGAATTTTCGTGTCAAAAAAGGTATAGAAGTTGGCTTAGGTGCCACTTTTCTATACGCAGACGACAGTGGAGTTGGCATTAATAGTGCTAGCCCACGATCAAACCTAGACGTTCGAGGTAGATCCCAAACAGAGGAACTACTGGTAGACAACTATGCAGAGGTGCAAGGACCCTCTACATTCGTTGGACTAGGTACCTTTGGGGGTGATCTATATGTTGGGAATGATCTATATGTAAAGGGCAACCTATCATTCACCAGTTTTGAATCTGAGACTGGTAATGTAACAGGTGTTCTTACCACAAGAGACTTTAATGTAACCGGATTATCTACGTTTGCGGGAGACGCCACCTTCCAAAGTGACGTAAATATCTCTGGTGCTTCTTCAATTACTGGAAACTTAGTAGTTTCTGGTGCCTCTACGCTCACAGGTATCGTCACAACTGGCGATGACCTCTATGTGGGTGGTAGTTTATATGTATTCAATGATATCTTCTATGATGAGATTACTGGTAGAAACCTCAGTATCTCTGGTATTGCCACACTCAGACAGTTAGAAATCCAACAGGACCTAGAAGTTGCAGGTCTCTCCACATTTGTTGGTTTAGTATCGTTCAGAGATGCAGTAGGTACAAACCTAACAGTTTATAATCTTTCCGCCAATACTGGTAACTTCGTAGAGATTAACGTCGATGGTGGAGGAGGAGGCGGTGGCGGTACTGGTATCGATAGTACCTCCGTCAATACCGAGTTCTTAAACGTCACTGGTGTTGCAACATTTAACAATGGTATTGCCACCAACTTCAGTGCAGAGTTTATTGACGCTGGTGTAACCACAACTACCGACCTCCACTTCACTAATGGTTACGGTGTCAATCTCAATATGAGTGGCATCACAACTGTTGGTATTCTAACAGTCTATGAGAATATCTATGACTCTAGAAACCAAGTTGGATATGGTGACTCACTACTAGTCACACAGGGTGGGAAACTAGTATGGACTAGACCTGATATTGCAGGTATTGCCACTTCATTCCAACCAGGTTCTACCTTCTATGTAAGTGAGAATGGTAGTAATACCAATGATGGTAGAAGTCCAGAGAAAGCATGGGGCTCTATTGCATATGCCGTATCACAGATTGGAGATACTTCTCACGATATTCTAGAGGTTACTGCTGGTGAATACACAGAAACCTTCCCTATCACAGTCCCTAAAGGTCTAACCATTTCTGGTGCTGGACAAAGGGCAACCATTGTTAGACCGTCACAGGCAACAGAAACCAATGATGGTTTCCTACTAAACGATAGATCCACTATCCATAACATCACAGTTACTGGATTCTACAAACCACAAGGTTCTATCAACTACGCCTTCAAGTTTAGTGTTGGAGCAGCAATCACCAGTAGAAGTCCTTATGTTGATAAGGTCACGGTCATCAACAAAGGTACTCAGACAAGTGCCAGTGACCCATATGGTTATGGTTCAGCTGACTCCTACCCAACCACAGCACCTGGTGGTGCTGGTGTTTTAGTTGATGGTAGTGTAGTTGCAACCAACTCACTAGAAGCAGCAATTCTCCTCAATGAGGTTACACTATTCACTGCTGGCAACCAAGGTATTAAGATTACCAATGGTGGTAGAGTAGAGTGGTTGAATGGTTTCATCTACTTCGCTTCTGAAGCACTTGTAGGTCTTAGTGATAAGACTACTGGTTTAGCGGGTGCTGGTAAGGCAAGACTAACCCTAGAGAACGCCTCTGGTGGATTGGTTGGTGGTAATACCGTTCAATACTATGATAGTGATGGAACCACAGTTCTTGCTTCTGGTACTATTGATAATGTATCTGGTAGTTATGTAACACTAACCAACGCTGGTGTTGGTACATTCACAACTCCTAGAAATAGAACAGCCAAGAAGGTTGACTTTGTTAATGGAGCACAACTATCCACAGCACAGGCAAGGTTCGGTACATCCTCACTAGATGTAACTGGTGCCGGAACTGATAACATCACAGTTGATTCCACTTCAGACTTTGGGTTTGGAACTGGAGACTTCACCGTTGAATTCTGGATATACAGAACTGGTAATATTAATGGTAAGGTAATCTGTGACTTCAGAGATACCGCCGCTACAGATCAGGCAATTACTATCCAAGGTGATGGTGGTAATGAGACTGATGTTTATATTGGTACTACATCCGTTGTCACTGGTACAGTTCCTACCACACTGAATGCTTGGAACCATATCGCTGTTTGTAGAGTTGGTTCTACCATCACTCAGTATATTGATGGTGCTGTTTCTGGTAGTGGAACTGCTGCTACTGATCTAGGTGTTGCTAGACAACTAACCTTTGGTGATAGGTACGACAATAGTAACAACGGTCCTACAGCATACCTAGATGAACTTCGTGTCACTAAGGGGGCAGCAAAATACACAGGAGCATTCACTTCACCTTCAGTAGCACTCACAGGTGATAAGGATACTTCTATCCTACTACACTTTGATGGTATCAATGGAGCAACCTCCACTACAGATGATATCATTGTCCTCCAGGATATTCGTATCACTGGTGGCAACACAGCAGATAAAGTTACCCTAGCAGACTACAGTCAGTTTGGTGCTGACCTCAGGTCTATCGCTTGTGCCATTGAATATGGTAACCAGGGTATGATTGGTGATGGTGATGGAGTAACTCTCCGTGCTATCTCTATCAACTTCAACCATGTAGGTGCTCTTGGTGATATCACTAACGATCCTAACCTAGCGATTCAATCGAACGAGGTTATCGAACTCAATGGTGGTCAAGTATCCTATGTAAGTATTGACCAGAAGGGTGACTTCCTAACGATCCTAACCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
34f0d279a233accfc7820768b8fda7f03629723accf7e5029b092f63cf7e9b75
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6088
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank