Protein

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Genbank accession
AXC36543.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MMNYGNVAPDKLKIRDIVAGANSLLLITEDNELWVRGNNAYGKLGIGTDTIVNVTEWTKVRDDVKFACASNLVCVVLTVDNKILYCGDEWFESGGSTSSKVVTWKDVTTQFSAVNLSTVREMKITYYCVGLLTNDNRLYAKGYDNNQSFGGSTSKVNAVLVASNVSKFYTSLSGTIYSSTTGGYYRCGISNTGALGTSTNLTSYNLYSAPEFASECAVGMSTLNSGILYYDTNGITRYVIAGQNRNYQLGNSSSNTTNVYSYTELTGYRGRFRDLWSDMNNSVLSFAISTDGNTLYYAGTNNTLSSGDPGVEYSSAFKEVPHGFNDITKAASLAYLSIVQDSTGWYYSGNATTLYGLPSSGEFIPLPLPTLI
Physico‐chemical
properties
protein length:372 AA
molecular weight: 40381,44120 Da
isoelectric point:5,04499
aromaticity:0,11828
hydropathy:-0,15699

Domains

Domains [InterPro]
DC_0433
ATT
1–128
DC_0433 DC_0886
IPR009091
STR
6–217
IPR009091
IPR009091
STR
11–322
IPR009091
IPR051553
Unmapped
11–307
IPR051553
DC_0433
ATT
113–227
DC_0433
AXC36543.1
1 372
Architecture
ATT
STR
RBD
ATT 1-227 | STR 228-322 | RBD 323-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC36543.1
1 372
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5173
Central domain 11 218 209 0,4654
C-terminal 219 372 153 0,2651
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-218
C-terminal
219-372

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UB
[NCBI] 		2268588 Uroviricota > Caudoviricetes > Asteriusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC36543.1 [NCBI]
Genbank nucleotide accession
MH383160 [NCBI]
CDS location
range 218014 -> 219132
strand +
CDS
ATGATGAATTATGGGAACGTAGCACCAGATAAACTAAAAATACGTGATATTGTTGCAGGTGCTAATTCATTATTACTAATAACAGAGGATAATGAATTATGGGTGCGTGGTAATAATGCGTATGGCAAATTAGGTATAGGAACTGATACTATAGTGAATGTAACCGAGTGGACTAAAGTTAGAGATGATGTTAAGTTTGCTTGTGCTAGTAATTTAGTATGCGTTGTATTAACTGTAGATAATAAAATTTTATACTGTGGTGATGAATGGTTTGAATCTGGTGGTTCGACAAGTTCTAAAGTTGTTACATGGAAAGATGTTACGACACAATTTAGTGCAGTGAATCTAAGCACAGTTCGTGAAATGAAAATAACTTATTATTGTGTAGGATTACTTACAAATGATAATAGATTATATGCTAAAGGATATGATAATAACCAATCATTTGGTGGTTCAACAAGCAAAGTTAATGCTGTATTAGTTGCGTCAAATGTTTCAAAATTCTACACTTCTCTATCTGGTACTATATATTCTAGTACTACTGGTGGTTACTATCGCTGTGGTATAAGCAATACTGGAGCATTGGGTACTAGCACAAATTTAACTTCTTATAATTTGTACTCTGCTCCCGAATTTGCATCCGAATGTGCAGTTGGTATGTCAACATTAAACTCTGGTATATTATATTATGATACTAATGGTATCACTAGATATGTTATAGCAGGTCAAAATAGAAATTATCAACTAGGTAATTCTTCTTCAAATACCACAAACGTATATTCGTATACAGAATTAACCGGATATAGAGGCAGGTTTAGGGATTTGTGGAGTGATATGAATAACTCTGTTCTTTCTTTTGCTATAAGCACAGATGGCAATACTTTATATTATGCTGGTACTAACAATACACTATCTTCTGGTGATCCTGGTGTTGAATATTCATCTGCATTCAAAGAAGTACCACACGGGTTTAATGATATAACAAAGGCGGCATCGTTAGCATATCTATCTATAGTGCAAGATTCAACGGGATGGTATTATTCTGGAAATGCAACTACGTTATATGGTTTGCCATCGAGTGGTGAATTTATACCATTACCATTACCAACATTAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d903452312e9d7c076fe27cfdf4c9db4bf9fb3d257388084b1ca4a7465857ef3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization Of A New Bacterial Virus From Orangutan (Pongo pygmaeus) Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2008-12 — GenBank
Genome Assembly Of Bacteriophage Specific To Escherichia coli 0157:H7 Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2019-07 — GenBank