Protein

View in Explore
Genbank accession
QQG33326.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVNNNSISPAQQAQADKRARDAAAAKRKQDTEVSNAKSREDIQYTMFVSGLRRGRMNEFESKNRTDDLAILFDSVTTHTYTKDYNKSSYAVESKAKASDHVTTQDGKFTFSGTVTDSPYLIDPRNMIDRDTDKENPMLARRPAKAIEILELIADSHQLVTLVTEDNILSNYVITSFQVDRSSETGSSIHVQVTLEEFRFKMVNKTVMARTSDPKKAKNANTGTKQTAEDGAVDDSAKQKRQTPYIGKNAETKERWENAAIGTTDFSGKPGAKLPFDPSDLMRK
Physico‐chemical
properties
protein length:284 AA
molecular weight: 31674,90350 Da
isoelectric point:8,52474
aromaticity:0,06338
hydropathy:-0,81901

Domains

Domains [InterPro]
DC_0712
ATT
1–70
DC_0712 DC_1100
IPR048494
ATT
73–206
IPR048494
QQG33326.1
1 284
Architecture
ATT
STR
ATT 1-206 | STR 207-270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PcCB7V
[NCBI] 		2798043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG33326.1 [NCBI]
Genbank nucleotide accession
MW367417.1 [NCBI]
CDS location
range 19252 -> 20106
strand +
CDS
ATGGCTGTGAACAACAATTCTATTTCGCCTGCCCAGCAGGCTCAGGCAGATAAGCGAGCACGAGACGCTGCCGCTGCCAAGAGAAAGCAGGATACGGAAGTCAGTAACGCCAAGTCTCGTGAAGACATTCAGTACACCATGTTCGTTTCCGGCCTGCGCCGTGGACGGATGAACGAGTTTGAGAGCAAAAACCGGACAGATGATCTGGCAATCCTTTTCGACTCAGTTACCACCCACACTTACACAAAGGACTACAACAAGTCAAGCTATGCGGTGGAGTCAAAGGCAAAAGCCTCTGACCACGTAACAACGCAGGATGGCAAGTTTACGTTCTCTGGCACAGTTACCGACTCCCCTTACTTGATTGACCCTCGGAACATGATTGACCGGGATACAGATAAGGAAAACCCGATGCTCGCCCGCCGCCCGGCGAAGGCCATCGAGATTCTCGAACTGATTGCCGACTCCCACCAGCTTGTAACTCTCGTCACCGAGGACAATATCCTCAGTAACTATGTCATCACCAGCTTCCAGGTGGATCGTAGTTCAGAGACAGGATCTTCGATCCACGTGCAGGTTACGTTGGAAGAGTTTCGATTCAAGATGGTTAACAAAACCGTAATGGCTCGTACTTCTGATCCCAAGAAAGCTAAAAACGCCAACACCGGGACGAAGCAAACGGCTGAAGACGGTGCGGTGGATGACAGTGCGAAGCAGAAGCGTCAAACACCGTATATCGGGAAGAATGCTGAAACAAAAGAGCGCTGGGAAAACGCAGCTATCGGCACCACTGATTTCAGCGGTAAGCCGGGAGCGAAGCTACCGTTTGACCCATCTGACCTGATGAGGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd206392dabf5c2786a68f1847eb40f688b189c301ba8d2e9ddfac4b767ec134
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7026
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of novel berlinvirus and novel certrevirus lytic for Pectobacterium car. car Petrzik,K., Kmoch,P., Vacek,J. and Brazdova,S. 2021-04-29 — GenBank