Protein

View in Explore
Genbank accession
WMM95019.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,75
Protein sequence
MGSVVSQSIPNFLNGMSQQTPTQRGINQGEDQINLQNGLVDGLSKRPPLDYVATVDNTNIYSNKTKFWQIQRDADNQYIVALYNGGVKVFGLDGTEKTVTVASGSGYLTSTNPRENFKLVNIADYTFVANTGTTVAADSTTSAAKVEEFLIVCKLTNYGREYKVALKHPSMAQELEVVFQLPSGNDASTDSKFRDTNKITDILLYGTSSTHWDSAANGIGFNVRRTDTNASVSTTQGLANYSGFTSYFTFEAYDSVIYGKPTDQNANYEITTSDGSGNTAMYAVRDEIQDFSKLPFYGKEGVIIKITGEEGDTLSDYYVKFSGKSGVWNETIAPATSVGLDNSTMPHALINNNDGTFTFQELDWTDRVCGDADTNPDPTFVGKKINNLTYYKNRLGILSGENLVLTENASFFNYFATTSTQVLDTDPIDIAASGTEVNTLKNSVGFNESLLLFSDTAQYKLDSSGETISPTSAILNQVSSFEHDDKVTPVSAGKFAYFAQARTNNTAIREYFADDDTLTNDGLDISVSVQNLIPSNCYQIISNTTEDTLIFLTSDTADTQTAPYSGTASTTYANTMYIYKYFFDGGEKVQNAWSKWTFEGVKIIGAMSLESFIYVLASEGTTTKLLKIDLRNLKDTTIGHGVYIDLKTSVTGTYDSATDLTTFVSPYGTKTGLIAVDKTNGNNYAVTNTSGSTYTIVGDHTSLFIGIPYESKYTMSTQYVRENTGRGLIAVTSGRYQIRNISFNFENSGYFQVEVTPTNRNTSTAIMNGYIIGTSTSIVGQPAIATGTLRVPVQCKNTEFTLDIKSSSHLPMYIAGAEVEGYYHNRARRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90759,29790 Da
isoelectric point:4,78138
aromaticity:0,10723
hydropathy:-0,31723

Domains

Domains [InterPro]
IPR058003
TTP
3–830
IPR058003
WMM95019.1
1 830
Architecture
TTP
TTP 3-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95019.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,9468
Central domain 134 332 200 0,6460
C-terminal 333 830 497 0,3786
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-133
Central
134-332
C-terminal
333-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC304P
[NCBI] 		3072839 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter
[NCBI] 		198251 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95019.1 [NCBI]
Genbank nucleotide accession
OR420736 [NCBI]
CDS location
range 22064 -> 24556
strand +
CDS
ATGGGAAGTGTTGTTTCACAATCTATTCCTAACTTCTTAAATGGTATGTCTCAACAGACGCCAACACAAAGAGGTATTAATCAAGGAGAAGACCAAATAAATTTACAAAATGGTTTAGTAGATGGTTTATCAAAAAGACCTCCTTTAGATTATGTAGCAACAGTAGATAATACTAATATTTATTCTAACAAAACAAAATTTTGGCAAATACAAAGAGATGCTGATAATCAATATATTGTAGCGTTATACAATGGAGGTGTAAAAGTATTTGGTTTAGATGGTACAGAAAAAACCGTTACTGTAGCAAGTGGGTCAGGTTATTTAACTTCTACAAACCCTAGAGAAAATTTTAAATTAGTTAACATAGCAGATTACACTTTTGTAGCAAACACAGGAACTACAGTTGCGGCTGATAGCACAACGTCTGCGGCTAAAGTAGAAGAGTTTTTAATTGTTTGTAAATTAACAAACTACGGTAGAGAATACAAAGTTGCATTGAAACACCCATCAATGGCACAAGAGCTAGAAGTTGTCTTTCAGTTACCTTCAGGTAATGATGCGTCAACTGATAGTAAATTTAGAGATACAAATAAAATAACAGATATACTTTTATATGGCACATCAAGTACACATTGGGACAGTGCCGCAAATGGTATAGGATTTAATGTTAGAAGAACAGATACAAATGCGTCTGTCTCTACTACACAAGGTTTAGCAAATTATTCTGGTTTCACATCATATTTTACTTTTGAAGCATACGACAGTGTAATCTATGGAAAGCCTACTGACCAAAATGCTAACTATGAAATTACTACATCTGACGGTTCTGGTAACACAGCCATGTATGCTGTTAGAGATGAAATACAAGATTTTAGTAAATTACCTTTTTATGGGAAAGAAGGAGTAATAATAAAAATTACTGGAGAAGAAGGTGATACACTTTCAGATTACTATGTAAAATTTTCAGGAAAGTCTGGTGTATGGAATGAAACTATTGCACCCGCTACATCTGTTGGTTTAGATAATTCTACAATGCCACACGCATTGATTAATAACAATGATGGAACTTTTACATTTCAAGAATTAGATTGGACAGATAGAGTATGTGGTGATGCTGATACAAACCCTGACCCAACTTTTGTTGGTAAAAAAATAAATAACTTAACTTATTATAAAAATAGATTAGGAATATTATCAGGAGAAAATTTAGTATTAACAGAAAATGCTTCGTTCTTTAATTATTTTGCTACAACATCAACACAAGTTTTAGATACAGACCCTATTGATATTGCGGCTTCAGGAACGGAAGTTAATACACTTAAAAACTCTGTAGGATTTAATGAGAGTTTATTATTATTTTCTGATACTGCACAATACAAACTAGATAGTTCAGGTGAAACAATTTCACCAACTTCAGCAATACTTAATCAAGTATCTTCATTTGAACATGATGATAAAGTTACACCAGTATCAGCAGGTAAGTTTGCATATTTTGCACAAGCAAGAACAAACAATACTGCAATAAGAGAATACTTTGCAGATGATGATACCTTAACAAATGATGGACTAGATATAAGTGTATCAGTACAAAATTTAATACCATCTAATTGCTATCAAATAATTAGTAACACTACTGAAGACACTTTAATATTTTTAACTTCAGATACGGCAGATACACAAACTGCTCCTTATAGTGGAACAGCGTCTACAACATACGCTAACACAATGTATATCTATAAGTATTTCTTTGATGGTGGAGAGAAGGTTCAAAACGCATGGTCTAAATGGACATTTGAAGGTGTAAAAATTATTGGTGCTATGTCATTAGAAAGTTTTATTTATGTCTTAGCTTCAGAAGGCACTACAACAAAATTATTAAAAATAGATTTAAGAAATTTAAAAGATACAACAATAGGTCATGGAGTTTACATTGACCTTAAAACTTCTGTTACAGGAACGTATGATAGTGCTACCGATTTAACAACATTTGTATCACCTTATGGTACAAAAACAGGTTTGATTGCAGTAGATAAAACTAACGGCAATAACTATGCTGTAACTAATACTTCAGGTTCAACTTATACTATTGTAGGAGACCATACATCATTGTTCATAGGCATTCCTTATGAAAGTAAGTATACAATGTCTACTCAGTATGTAAGAGAAAATACAGGAAGAGGATTAATAGCAGTAACTTCAGGTAGATACCAAATACGAAACATATCATTTAATTTTGAAAATAGTGGATACTTTCAAGTTGAAGTTACACCAACTAATAGAAACACATCTACAGCTATTATGAATGGTTATATTATTGGAACGTCTACATCTATTGTAGGACAACCTGCTATTGCTACAGGAACTTTAAGAGTGCCTGTTCAATGTAAAAATACAGAATTTACTTTAGATATTAAATCGTCATCTCACTTGCCTATGTATATCGCAGGGGCAGAAGTTGAAGGTTATTATCATAACAGAGCAAGAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf526d2df33d7dcd3403c5a358988eaeb8eb5d61848fe988ade66e4935064291
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2899
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50